Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1445

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,778,800	+		BT1443	0.79	-1.6
1,778,821	+		BT1443	0.81	-2.1
1,778,824	-		BT1443	0.82	+1.9
1,778,824	-		BT1443	0.82	+0.4
1,778,824	-		BT1443	0.82	-1.2
1,778,917	+		BT1443	0.90	-2.0
1,778,918	-		BT1443	0.90	+1.9
1,779,017	+				-0.6
1,779,122	+		BT1444	0.13	-2.8
1,779,190	+		BT1444	0.24	+0.4
1,779,392	-		BT1444	0.54	-1.2
1,779,451	+		BT1444	0.63	-1.8
1,779,686	+				-0.6
1,779,708	+				+0.4
1,779,708	+				-2.4
1,779,923	+		BT1445	0.28	-1.4
1,779,941	-		BT1445	0.30	-1.6
1,779,956	+		BT1445	0.32	-1.4
1,780,024	-		BT1445	0.41	+0.4
1,780,032	+		BT1445	0.42	+0.4
1,780,033	-		BT1445	0.42	-2.8
1,780,033	-		BT1445	0.42	+0.4
1,780,092	+		BT1445	0.49	-1.2
1,780,093	-		BT1445	0.50	-2.0
1,780,187	-		BT1445	0.62	-1.2
1,780,234	-		BT1445	0.68	-0.1
1,780,234	-		BT1445	0.68	-1.9
1,780,235	+		BT1445	0.68	-1.6
1,780,447	+				-3.0
1,780,448	-				-0.6
1,780,448	-				-1.4
1,780,448	-				+0.0
1,780,460	-				-3.6
1,780,460	-				-1.6
1,780,467	-				-1.7
1,780,467	-				-2.2
1,780,485	-				+0.4
1,780,639	+		BT1446	0.24	-0.6
1,780,639	+		BT1446	0.24	-2.7
1,780,640	-		BT1446	0.24	-2.3
1,780,640	-		BT1446	0.24	+0.4
1,780,791	-		BT1446	0.47	-2.4
1,780,884	+		BT1446	0.62	-2.4
1,780,885	-		BT1446	0.62	+1.9
1,780,933	+		BT1446	0.69	-1.9
1,780,933	+		BT1446	0.69	-0.6
1,780,934	-		BT1446	0.69	-0.6
1,780,997	+		BT1446	0.79	-0.6
1,780,997	+		BT1446	0.79	-2.4
1,781,003	-		BT1446	0.80	+0.4
1,781,009	+		BT1446	0.81	-1.6
1,781,034	-		BT1446	0.85	-1.6
1,781,051	+		BT1446	0.87	-0.6
1,781,064	-		BT1446	0.89	-1.2
1,781,064	-		BT1446	0.89	+0.4
1,781,139	+				+1.4
1,781,139	+				-0.6
1,781,140	-				+0.4
1,781,141	+				-0.1
1,781,142	-				+0.0
1,781,156	-				+0.4
1,781,454	-		BT1447	0.13	-0.6
1,781,467	-		BT1447	0.13	-1.6