Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1420

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,752,323	+		BT1418	0.79	-1.2
1,752,323	+		BT1418	0.79	-1.2
1,752,324	-		BT1418	0.79	+0.0
1,752,340	+		BT1418	0.82	-1.7
1,752,345	-		BT1418	0.83	-0.2
1,752,368	+		BT1418	0.87	-1.3
1,752,368	+		BT1418	0.87	+0.6
1,752,393	+				-0.5
1,752,429	-				+0.3
1,752,472	+				-1.4
1,752,497	+				-0.7
1,752,497	+				+0.3
1,752,508	-				+0.9
1,752,600	+				-3.0
1,752,667	+		BT1419	0.13	-2.8
1,752,747	-		BT1419	0.29	+0.4
1,752,791	-		BT1419	0.38	-1.6
1,752,879	+		BT1419	0.56	-0.1
1,752,879	+		BT1419	0.56	-0.6
1,752,893	-		BT1419	0.59	-1.2
1,753,037	+		BT1419	0.88	-2.5
1,753,191	+				-2.6
1,753,192	-				+0.4
1,753,303	+				-1.0
1,753,369	-		BT1420	0.13	+0.4
1,753,393	+		BT1420	0.14	-2.0
1,753,501	+		BT1420	0.19	-0.6
1,753,665	+		BT1420	0.26	-3.2
1,753,799	-		BT1420	0.33	-2.2
1,753,906	+		BT1420	0.38	-0.7
1,753,916	+		BT1420	0.38	-2.5
1,753,932	+		BT1420	0.39	-2.0
1,753,990	+		BT1420	0.41	-2.0
1,753,999	-		BT1420	0.42	-2.5
1,754,004	+		BT1420	0.42	+0.3
1,754,045	-		BT1420	0.44	+0.3
1,754,054	-		BT1420	0.44	+0.3
1,754,153	-		BT1420	0.49	-1.7
1,754,512	+		BT1420	0.66	+0.3
1,754,513	-		BT1420	0.66	-1.2
1,754,784	-		BT1420	0.78	+0.3
1,754,798	+		BT1420	0.79	-1.2
1,754,798	+		BT1420	0.79	-1.2
1,754,948	+		BT1420	0.86	-3.1
1,755,013	+		BT1420	0.89	-1.2
1,755,013	+		BT1420	0.89	-2.4
1,755,169	+				-0.6
1,755,170	-				+0.4
1,755,170	-				-0.6
1,755,212	+				+1.4
1,755,238	+				-1.2
1,755,272	+				-0.6
1,755,301	+				-1.2
1,755,302	-				+0.9
1,755,337	+				-1.6
1,755,341	+				+0.4
1,755,408	+		BT1421	0.22	-2.2
1,755,408	+		BT1421	0.22	-1.6
1,755,485	+		BT1421	0.46	-3.0
1,755,610	+		BT1421	0.86	-0.4
1,755,623	-				-1.4
1,755,626	+				-1.6
1,755,626	+				-0.6
1,755,650	+				+0.4
1,755,851	-				-1.1
1,755,870	+				-1.6
1,755,871	-				-0.6
1,755,933	+		BT1422	0.24	+0.4
1,755,966	+		BT1422	0.33	-2.1
1,756,021	-		BT1422	0.49	-2.0
1,756,045	-		BT1422	0.56	-2.2
1,756,125	+		BT1422	0.79	-1.2
1,756,126	-		BT1422	0.80	-0.2
1,756,138	+		BT1422	0.83	-2.6
1,756,138	+		BT1422	0.83	-1.6
1,756,182	+				-0.4
1,756,182	+				-0.6
1,756,185	+				-1.2
1,756,190	-				-2.2
1,756,220	+				-0.6
1,756,221	-				-1.5
1,756,221	-				+0.4
1,756,221	-				-1.6