Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1348

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,672,702	+				-0.7
1,672,767	-				+0.3
1,672,767	-				-1.9
1,672,809	-				-2.3
1,672,859	+		BT1347	0.11	-3.1
1,672,940	+		BT1347	0.20	-2.3
1,673,005	+		BT1347	0.28	+0.3
1,673,005	+		BT1347	0.28	-1.7
1,673,014	+		BT1347	0.29	-0.7
1,673,108	+		BT1347	0.40	-1.3
1,673,108	+		BT1347	0.40	-3.4
1,673,112	+		BT1347	0.40	+0.3
1,673,163	+		BT1347	0.46	-1.7
1,673,259	+		BT1347	0.58	-1.3
1,673,263	+		BT1347	0.58	-0.7
1,673,263	+		BT1347	0.58	-1.7
1,673,404	+		BT1347	0.74	-3.4
1,673,404	+		BT1347	0.74	-0.9
1,673,517	+		BT1347	0.88	-1.3
1,673,522	+		BT1347	0.88	-0.7
1,673,540	+				-1.5
1,673,557	-				-1.3
1,673,565	+				-0.8
1,673,566	-				-0.7
1,673,592	+				-1.8
1,673,594	+				-2.5
1,673,594	+				-1.3
1,673,643	+				-0.7
1,673,688	-				-0.7
1,673,728	+				+0.3
1,673,729	-				+0.0
1,673,746	+		BT1348	0.11	+0.3
1,673,761	+		BT1348	0.13	-0.3
1,673,761	+		BT1348	0.13	-0.7
1,673,872	+		BT1348	0.25	-0.7
1,673,879	-		BT1348	0.26	-0.7
1,673,939	+		BT1348	0.33	-3.3
1,673,939	+		BT1348	0.33	-1.3
1,673,956	+		BT1348	0.35	-2.4
1,673,990	-		BT1348	0.38	-0.7
1,674,015	+		BT1348	0.41	-1.7
1,674,151	+		BT1348	0.56	+0.3
1,674,232	+		BT1348	0.66	-2.7
1,674,260	+		BT1348	0.69	-2.0
1,674,551	+				+0.3
1,674,810	+		BT1349	0.62	-0.7
1,674,950	+				-2.0
1,674,950	+				-0.7
1,674,952	+				-2.7
1,674,952	+				-1.3
1,674,952	+				-0.7
1,674,954	+				-2.1
1,675,008	+				-2.6
1,675,042	+				+0.3
1,675,046	+				-1.8
1,675,046	+				-1.3
1,675,050	+				-1.8
1,675,050	+				-0.7
1,675,050	+				-1.0
1,675,051	-				-0.7
1,675,052	+				-1.7
1,675,138	+		BT1350	0.15	-1.8
1,675,138	+		BT1350	0.15	-1.7
1,675,143	+		BT1350	0.16	+0.3
1,675,193	+		BT1350	0.20	-1.3
1,675,245	+		BT1350	0.25	-2.5
1,675,266	+		BT1350	0.27	-1.0
1,675,320	+		BT1350	0.32	-0.2
1,675,325	+		BT1350	0.32	-0.9
1,675,339	+		BT1350	0.34	-1.3
1,675,339	+		BT1350	0.34	-1.3
1,675,448	+		BT1350	0.44	-3.2
1,675,491	+		BT1350	0.47	-1.0
1,675,491	+		BT1350	0.47	-0.7
1,675,527	-		BT1350	0.51	+0.3
1,675,527	-		BT1350	0.51	+0.3