Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1347

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,671,821	+				+1.3
1,671,840	+		BT1346	0.11	+0.3
1,671,852	+		BT1346	0.12	-0.7
1,671,887	+		BT1346	0.15	-3.1
1,671,955	+		BT1346	0.22	+1.3
1,671,978	+		BT1346	0.24	-3.0
1,672,020	+		BT1346	0.28	-1.3
1,672,045	-		BT1346	0.31	+0.3
1,672,084	-		BT1346	0.34	-0.7
1,672,123	+		BT1346	0.38	-2.5
1,672,172	-		BT1346	0.43	+0.3
1,672,208	+		BT1346	0.46	-1.7
1,672,208	+		BT1346	0.46	+0.8
1,672,211	-		BT1346	0.47	-0.7
1,672,243	+		BT1346	0.50	-2.7
1,672,257	+		BT1346	0.51	-1.1
1,672,376	+		BT1346	0.63	-1.3
1,672,385	-		BT1346	0.64	+0.3
1,672,408	+		BT1346	0.66	-2.0
1,672,508	+		BT1346	0.76	-1.7
1,672,516	+		BT1346	0.77	-1.8
1,672,516	+		BT1346	0.77	-1.7
1,672,523	+		BT1346	0.77	-1.3
1,672,603	+		BT1346	0.85	-0.7
1,672,702	+				-0.7
1,672,767	-				+0.3
1,672,767	-				-1.9
1,672,809	-				-2.3
1,672,859	+		BT1347	0.11	-3.1
1,672,940	+		BT1347	0.20	-2.3
1,673,005	+		BT1347	0.28	+0.3
1,673,005	+		BT1347	0.28	-1.7
1,673,014	+		BT1347	0.29	-0.7
1,673,108	+		BT1347	0.40	-1.3
1,673,108	+		BT1347	0.40	-3.4
1,673,112	+		BT1347	0.40	+0.3
1,673,163	+		BT1347	0.46	-1.7
1,673,259	+		BT1347	0.58	-1.3
1,673,263	+		BT1347	0.58	-0.7
1,673,263	+		BT1347	0.58	-1.7
1,673,404	+		BT1347	0.74	-3.4
1,673,404	+		BT1347	0.74	-0.9
1,673,517	+		BT1347	0.88	-1.3
1,673,522	+		BT1347	0.88	-0.7
1,673,540	+				-1.5
1,673,557	-				-1.3
1,673,565	+				-0.8
1,673,566	-				-0.7
1,673,592	+				-1.8
1,673,594	+				-2.5
1,673,594	+				-1.3
1,673,643	+				-0.7
1,673,688	-				-0.7
1,673,728	+				+0.3
1,673,729	-				+0.0
1,673,746	+		BT1348	0.11	+0.3
1,673,761	+		BT1348	0.13	-0.3
1,673,761	+		BT1348	0.13	-0.7
1,673,872	+		BT1348	0.25	-0.7
1,673,879	-		BT1348	0.26	-0.7
1,673,939	+		BT1348	0.33	-3.3
1,673,939	+		BT1348	0.33	-1.3
1,673,956	+		BT1348	0.35	-2.4
1,673,990	-		BT1348	0.38	-0.7
1,674,015	+		BT1348	0.41	-1.7
1,674,151	+		BT1348	0.56	+0.3
1,674,232	+		BT1348	0.66	-2.7
1,674,260	+		BT1348	0.69	-2.0
1,674,551	+				+0.3