Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT1312 and BT1313 are separated by 219 nucleotides BT1313 and BT1314 are separated by 18 nucleotides
BT1312: BT1312 - serine protease precursor (NCBI ptt file), at 1,635,993 to 1,637,528
BT1312
BT1313: BT1313 - muconate cycloisomerase (NCBI ptt file), at 1,637,748 to 1,638,899
BT1313
BT1314: BT1314 - dipeptidyl-peptidase VI (NCBI ptt file), at 1,638,918 to 1,639,904
BT1314
Position (kb)
1637
1638
1639 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1636.781 kb on + strand, within BT1312 at 1637.130 kb on + strand, within BT1312 at 1637.296 kb on - strand, within BT1312 at 1637.353 kb on - strand, within BT1312 at 1637.721 kb on + strand at 1637.922 kb on - strand, within BT1313 at 1638.046 kb on - strand, within BT1313 at 1638.314 kb on + strand, within BT1313 at 1638.365 kb on + strand, within BT1313 at 1638.425 kb on + strand, within BT1313 at 1638.620 kb on - strand, within BT1313 at 1638.630 kb on - strand, within BT1313 at 1638.661 kb on + strand, within BT1313 at 1638.693 kb on - strand, within BT1313 at 1638.735 kb on + strand, within BT1313 at 1638.781 kb on + strand, within BT1313 at 1638.971 kb on + strand at 1638.976 kb on - strand at 1638.979 kb on + strand at 1639.066 kb on - strand, within BT1314 at 1639.105 kb on + strand, within BT1314 at 1639.133 kb on + strand, within BT1314 at 1639.203 kb on + strand, within BT1314 at 1639.221 kb on + strand, within BT1314 at 1639.225 kb on + strand, within BT1314 at 1639.260 kb on - strand, within BT1314 at 1639.334 kb on - strand, within BT1314 at 1639.424 kb on + strand, within BT1314 at 1639.438 kb on + strand, within BT1314 at 1639.571 kb on - strand, within BT1314 at 1639.637 kb on + strand, within BT1314 at 1639.711 kb on - strand, within BT1314 at 1639.757 kb on + strand, within BT1314 at 1639.798 kb on - strand, within BT1314 at 1639.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Amylopectin from Potato; autoclaved 2.5 mg/ml (C) remove 1,636,781 + BT1312 0.51 +0.1 1,637,130 + BT1312 0.74 -2.8 1,637,296 - BT1312 0.85 -0.6 1,637,353 - BT1312 0.89 -2.8 1,637,721 + -1.7 1,637,922 - BT1313 0.15 -2.7 1,638,046 - BT1313 0.26 -1.7 1,638,314 + BT1313 0.49 -1.2 1,638,365 + BT1313 0.54 +0.3 1,638,425 + BT1313 0.59 -2.5 1,638,620 - BT1313 0.76 -1.2 1,638,630 - BT1313 0.77 +0.3 1,638,661 + BT1313 0.79 -0.7 1,638,693 - BT1313 0.82 +0.3 1,638,735 + BT1313 0.86 -2.5 1,638,781 + BT1313 0.90 +0.3 1,638,971 + -0.7 1,638,976 - -1.7 1,638,979 + -0.2 1,639,066 - BT1314 0.15 -0.1 1,639,105 + BT1314 0.19 +0.9 1,639,133 + BT1314 0.22 +0.3 1,639,203 + BT1314 0.29 -1.3 1,639,221 + BT1314 0.31 +0.9 1,639,225 + BT1314 0.31 -0.2 1,639,260 - BT1314 0.35 +0.3 1,639,334 - BT1314 0.42 -0.2 1,639,424 + BT1314 0.51 -1.7 1,639,438 + BT1314 0.53 +1.7 1,639,571 - BT1314 0.66 +0.3 1,639,637 + BT1314 0.73 -0.4 1,639,711 - BT1314 0.80 -0.9 1,639,757 + BT1314 0.85 -1.8 1,639,798 - BT1314 0.89 -0.7 1,639,864 - +0.3
Or see this region's nucleotide sequence