Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1275

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,584,394	+		BT1273	0.88	-0.7
1,584,439	+				+0.9
1,584,439	+				-1.2
1,584,509	+				-1.4
1,584,509	+				+1.3
1,584,510	-				-0.7
1,584,588	+				+0.9
1,584,604	-				-0.7
1,584,666	+				+0.3
1,584,699	+				-1.6
1,584,700	-				+1.3
1,584,712	-				-1.2
1,584,725	-				-1.2
1,584,899	-		BT1274	0.27	+0.3
1,584,902	-		BT1274	0.28	-0.8
1,584,941	-		BT1274	0.34	-1.2
1,584,987	+		BT1274	0.41	+1.3
1,584,988	-		BT1274	0.41	-0.3
1,584,993	+		BT1274	0.42	+1.1
1,585,108	-		BT1274	0.60	-0.7
1,585,210	-		BT1274	0.76	-0.7
1,585,236	-		BT1274	0.80	-0.7
1,585,246	+		BT1274	0.82	-2.2
1,585,275	+		BT1274	0.86	+0.3
1,585,361	+				-1.7
1,585,376	-				-0.4
1,585,403	+				+0.1
1,585,486	-				-0.2
1,585,558	+		BT1275	0.13	-0.7
1,585,617	+		BT1275	0.17	+0.8
1,585,618	-		BT1275	0.17	-0.4
1,585,622	-		BT1275	0.17	-1.2
1,585,723	-		BT1275	0.24	-0.1
1,585,731	+		BT1275	0.25	-2.0
1,585,751	+		BT1275	0.26	-0.7
1,585,751	+		BT1275	0.26	-1.9
1,585,752	-		BT1275	0.26	-2.3
1,585,768	-		BT1275	0.27	-1.2
1,585,768	-		BT1275	0.27	-0.9
1,585,768	-		BT1275	0.27	+0.3
1,585,773	+		BT1275	0.28	-0.2
1,585,773	+		BT1275	0.28	+1.7
1,585,774	-		BT1275	0.28	-2.0
1,585,787	-		BT1275	0.29	+0.3
1,585,828	-		BT1275	0.31	-1.2
1,585,877	+		BT1275	0.35	-1.2
1,585,881	-		BT1275	0.35	-0.7
1,586,070	+		BT1275	0.48	-0.7
1,586,208	+		BT1275	0.58	-2.2
1,586,257	-		BT1275	0.61	-1.7
1,586,352	-		BT1275	0.68	+2.3
1,586,357	-		BT1275	0.68	-1.4
1,586,399	-		BT1275	0.71	+0.3
1,586,520	+		BT1275	0.80	+0.3
1,586,521	-		BT1275	0.80	-1.0
1,586,764	-				-1.2
1,586,767	-				-1.2
1,586,790	+				-0.5
1,586,791	-				-0.7
1,586,791	-				+0.3
1,586,915	-		BT1276	0.25	+0.9
1,586,950	+		BT1276	0.34	-0.4
1,586,951	-		BT1276	0.34	+0.3
1,586,951	-		BT1276	0.34	+0.3
1,586,951	-		BT1276	0.34	-1.2
1,586,983	+		BT1276	0.42	-1.7
1,586,983	+		BT1276	0.42	-2.0
1,587,006	+		BT1276	0.48	+0.0
1,587,006	+		BT1276	0.48	+0.3
1,587,196	+				+1.3
1,587,200	+				+0.3
1,587,238	+				-0.2
1,587,238	+				-0.7
1,587,239	-				+0.5
1,587,248	-				-3.4
1,587,277	+				-1.2
1,587,289	-				+1.3
1,587,292	+				-1.2
1,587,292	+				+0.3
1,587,293	-				-1.2
1,587,296	-				-2.2
1,587,334	+				-0.7
1,587,484	-		BT1277	0.20	-1.2
1,587,504	-		BT1277	0.21	-2.2
1,587,551	+		BT1277	0.25	-1.8
1,587,572	+		BT1277	0.26	-1.0
1,587,625	+		BT1277	0.30	-2.2
1,587,628	-		BT1277	0.30	-2.0
1,587,655	+		BT1277	0.32	+0.3
1,587,717	+		BT1277	0.37	-0.7
1,587,718	-		BT1277	0.37	-1.1
1,587,740	-		BT1277	0.39	-1.8