Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1081

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,366,200	+		BT1079	0.34	-1.2
1,366,571	-				-1.0
1,366,667	-		BT1080	0.23	-1.1
1,366,966	-		BT1080	0.90	-0.5
1,367,015	-				+1.1
1,367,151	-		BT1081	0.17	-1.6
1,367,188	-		BT1081	0.23	-0.9
1,367,286	-		BT1081	0.39	-2.2
1,367,474	-		BT1081	0.69	+0.4
1,367,496	-		BT1081	0.72	-1.6
1,367,765	-				-0.6
1,367,771	+				-2.2
1,367,774	+				+0.0
1,367,776	+				+0.4
1,367,874	+				+1.9
1,367,876	+				-1.2
1,367,879	-				-1.2
1,367,879	-				+0.4
1,367,965	-				-0.6
1,367,967	-				-1.8
1,367,998	-				+0.4
1,368,000	-				-1.1
1,368,057	+		BT1082	0.13	-2.2
1,368,064	-		BT1082	0.13	-1.2
1,368,194	+		BT1082	0.23	+0.4
1,368,280	+		BT1082	0.29	-1.8
1,368,325	+		BT1082	0.33	+0.4
1,368,361	+		BT1082	0.36	+0.1
1,368,560	+		BT1082	0.51	-1.2
1,368,561	-		BT1082	0.51	+1.4
1,368,561	-		BT1082	0.51	-0.4
1,368,564	+		BT1082	0.51	-1.0
1,368,564	+		BT1082	0.51	-0.7
1,368,564	+		BT1082	0.51	-0.6