Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1059

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,344,885	-		BT1058	0.20	-2.9
1,344,885	-		BT1058	0.20	-2.8
1,344,885	-		BT1058	0.20	-2.4
1,344,960	-		BT1058	0.26	-1.2
1,344,963	+		BT1058	0.27	-0.6
1,344,978	-		BT1058	0.28	+0.4
1,344,992	+		BT1058	0.29	-1.8
1,344,992	+		BT1058	0.29	-1.2
1,344,992	+		BT1058	0.29	+0.4
1,345,050	-		BT1058	0.34	-2.7
1,345,180	-		BT1058	0.46	-0.6
1,345,188	+		BT1058	0.47	+0.4
1,345,189	-		BT1058	0.47	-2.6
1,345,189	-		BT1058	0.47	-0.5
1,345,228	+		BT1058	0.50	-2.4
1,345,228	+		BT1058	0.50	-3.1
1,345,244	+		BT1058	0.51	-1.6
1,345,275	-		BT1058	0.54	-0.6
1,345,334	-		BT1058	0.59	-0.6
1,345,341	-		BT1058	0.60	-2.8
1,345,350	+		BT1058	0.61	-2.4
1,345,350	+		BT1058	0.61	-2.6
1,345,355	+		BT1058	0.61	-3.0
1,345,356	-		BT1058	0.61	-2.8
1,345,384	-		BT1058	0.64	-3.0
1,345,388	+		BT1058	0.64	-0.1
1,345,512	-		BT1058	0.75	+0.4
1,345,515	-		BT1058	0.75	-3.3
1,345,526	+		BT1058	0.76	-1.2
1,345,739	+				+0.4
1,345,764	-				-1.6
1,345,779	-				-1.6
1,345,828	+				-3.4
1,345,874	-				-2.2
1,345,907	+				-1.6
1,345,907	+				-2.5
1,346,104	+		BT1059	0.31	-2.6
1,346,105	-		BT1059	0.31	-1.2
1,346,140	-		BT1059	0.35	-1.2
1,346,142	-		BT1059	0.35	-2.0
1,346,172	-		BT1059	0.38	+0.4
1,346,203	+		BT1059	0.42	-3.3
1,346,227	+		BT1059	0.44	-2.2
1,346,275	-		BT1059	0.49	+0.4
1,346,317	-		BT1059	0.54	-0.6
1,346,622	-		BT1059	0.87	-2.9
1,346,623	+		BT1059	0.87	-1.2
1,346,623	+		BT1059	0.87	-1.2
1,346,624	-		BT1059	0.87	-1.6
1,346,624	-		BT1059	0.87	-1.6
1,346,662	+				-0.6
1,346,662	+				-1.2
1,346,682	-				+1.4
1,346,736	-				+0.4
1,346,798	+				-2.6
1,346,830	+				-4.0
1,346,919	+				-0.6
1,346,971	+				-1.0
1,347,030	+				-1.2
1,347,047	+				-0.7
1,347,047	+				-1.3
1,347,047	+				-1.6
1,347,050	-				+1.4
1,347,064	+		BT1060	0.11	-1.6
1,347,163	+		BT1060	0.22	-1.2
1,347,164	-		BT1060	0.22	+0.4
1,347,199	-		BT1060	0.25	-0.3
1,347,202	-		BT1060	0.26	+0.4
1,347,202	-		BT1060	0.26	+0.4
1,347,230	+		BT1060	0.29	-1.1
1,347,295	+		BT1060	0.35	-1.2
1,347,327	+		BT1060	0.39	-2.0
1,347,394	+		BT1060	0.46	-0.6
1,347,533	-		BT1060	0.60	-1.6
1,347,535	-		BT1060	0.61	-1.5
1,347,552	+		BT1060	0.62	+0.0
1,347,552	+		BT1060	0.62	+0.4
1,347,667	+		BT1060	0.74	-1.1
1,347,671	+		BT1060	0.75	-1.2
1,347,671	+		BT1060	0.75	-1.2
1,347,701	+		BT1060	0.78	-1.2
1,347,707	+		BT1060	0.79	-0.9
1,347,722	-		BT1060	0.80	-1.2
1,347,726	+		BT1060	0.81	-1.1
1,347,733	+		BT1060	0.81	-1.2