Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1019

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,272,473	-		BT1018	0.29	-2.0
1,272,521	+		BT1018	0.33	-0.7
1,272,661	+		BT1018	0.43	+1.3
1,272,767	-		BT1018	0.51	+0.3
1,272,953	-		BT1018	0.65	-0.7
1,272,962	-		BT1018	0.66	+1.3
1,272,968	-		BT1018	0.66	-0.7
1,273,015	+		BT1018	0.70	-1.2
1,273,045	+		BT1018	0.72	-1.8
1,273,137	+		BT1018	0.79	+0.3
1,273,304	-				+0.7
1,273,345	+				-0.2
1,273,437	+				+0.9
1,273,477	+				-1.7
1,273,479	+				+0.0
1,273,623	+				-1.2
1,273,624	-				-0.3
1,273,841	-		BT1019	0.14	-0.9
1,273,924	+		BT1019	0.17	+0.3
1,274,060	-		BT1019	0.22	+1.3
1,274,107	+		BT1019	0.23	-0.7
1,274,176	+		BT1019	0.26	-1.7
1,274,263	-		BT1019	0.29	+0.3
1,274,266	-		BT1019	0.29	-0.2
1,274,329	-		BT1019	0.31	+0.3
1,274,383	+		BT1019	0.33	+0.3
1,274,384	-		BT1019	0.33	-2.2
1,274,416	-		BT1019	0.35	+0.8
1,274,541	+		BT1019	0.39	-1.2
1,274,541	+		BT1019	0.39	+2.9
1,274,616	+		BT1019	0.42	-0.7
1,274,636	-		BT1019	0.43	-0.7
1,274,722	+		BT1019	0.46	-0.7
1,274,818	+		BT1019	0.49	+0.8
1,274,818	+		BT1019	0.49	-1.2
1,274,818	+		BT1019	0.49	+0.3
1,274,879	+		BT1019	0.51	-1.7
1,274,917	-		BT1019	0.53	+0.3
1,274,917	-		BT1019	0.53	-0.1
1,275,002	-		BT1019	0.56	+0.3
1,275,035	+		BT1019	0.57	-0.9
1,275,068	+		BT1019	0.58	+0.3
1,275,204	+		BT1019	0.63	+0.1
1,275,368	-		BT1019	0.69	-0.7
1,275,446	+		BT1019	0.72	+1.5
1,275,585	+		BT1019	0.77	+0.3
1,275,585	+		BT1019	0.77	-1.2
1,275,589	+		BT1019	0.77	+1.3
1,275,589	+		BT1019	0.77	-2.2
1,275,592	+		BT1019	0.77	+0.3
1,275,594	+		BT1019	0.77	-1.2
1,275,607	+		BT1019	0.78	-0.5
1,275,696	+		BT1019	0.81	-0.7
1,275,806	-		BT1019	0.85	+0.3
1,276,013	-				-0.8
1,276,038	-				+1.3
1,276,238	-				-0.7
1,276,320	-				+0.3
1,276,320	-				+0.3
1,276,756	+		BT1020	0.12	+0.3
1,276,756	+		BT1020	0.12	-1.2
1,276,788	+		BT1020	0.13	-1.7
1,276,788	+		BT1020	0.13	-0.2
1,276,842	+		BT1020	0.15	+0.3
1,277,012	+		BT1020	0.20	-1.2
1,277,087	-		BT1020	0.22	+0.9
1,277,127	+		BT1020	0.23	+0.3
1,277,127	+		BT1020	0.23	-0.9
1,277,132	+		BT1020	0.23	+0.3
1,277,198	+		BT1020	0.25	-2.5
1,277,202	+		BT1020	0.26	-0.4