Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0738
Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Amylopectin from Potato; autoclaved 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
915,146 | + | BT0737 | 0.65 | -0.2 | |
915,159 | - | BT0737 | 0.65 | +0.1 | |
915,270 | + | BT0737 | 0.72 | -2.0 | |
915,338 | + | BT0737 | 0.76 | -0.8 | |
915,381 | - | BT0737 | 0.79 | +0.7 | |
915,537 | + | BT0737 | 0.88 | -2.0 | |
915,538 | - | BT0737 | 0.88 | -1.7 | |
915,602 | + | -2.5 | |||
915,605 | - | -3.0 | |||
915,659 | + | -0.3 | |||
915,660 | - | -0.7 | |||
915,784 | - | -0.7 | |||
915,834 | - | +1.9 | |||
915,838 | - | -1.2 | |||
915,849 | + | -0.2 | |||
915,880 | + | +0.3 | |||
915,911 | - | -2.0 | |||
915,913 | - | +0.3 | |||
915,966 | + | +0.3 | |||
916,032 | + | -1.2 | |||
916,080 | - | -2.0 | |||
916,173 | - | -3.2 | |||
916,282 | + | BT0738 | 0.13 | -2.0 | |
916,387 | + | BT0738 | 0.21 | -0.7 | |
916,388 | - | BT0738 | 0.21 | -2.0 | |
916,388 | - | BT0738 | 0.21 | -4.4 | |
916,580 | + | BT0738 | 0.36 | -1.7 | |
916,581 | - | BT0738 | 0.36 | -3.2 | |
916,605 | - | BT0738 | 0.38 | -2.0 | |
916,738 | + | BT0738 | 0.48 | -1.0 | |
916,738 | + | BT0738 | 0.48 | -1.7 | |
917,008 | - | BT0738 | 0.69 | -0.7 | |
917,038 | + | BT0738 | 0.72 | -2.0 | |
917,263 | - | BT0738 | 0.89 | -2.0 | |
917,269 | + | BT0738 | 0.90 | -0.7 | |
917,447 | + | -4.8 | |||
917,739 | - | BT0739 | 0.16 | -0.2 | |
917,922 | - | BT0739 | 0.41 | -1.2 | |
918,011 | - | BT0739 | 0.53 | -1.2 | |
918,080 | - | BT0739 | 0.62 | -1.2 | |
918,354 | - | +0.3 |
Or see this region's nucleotide sequence