Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0530 and BT0531 are separated by 4 nucleotides BT0531 and BT0532 are separated by 68 nucleotides
BT0530: BT0530 - anthranilate phosphoribosyltransferase (EC 2.4.2.18) <small>(from data)</small>, at 653,313 to 654,311
BT0530
BT0531: BT0531 - anthranilate synthase component II (NCBI ptt file), at 654,316 to 654,882
BT0531
BT0532: BT0532 - anthranilate synthase component I (NCBI ptt file), at 654,951 to 656,357
BT0532
Position (kb) 654
655 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 653.424 kb on + strand, within BT0530 at 653.451 kb on - strand, within BT0530 at 653.498 kb on + strand, within BT0530 at 653.609 kb on + strand, within BT0530 at 653.699 kb on + strand, within BT0530 at 653.700 kb on - strand, within BT0530 at 653.701 kb on + strand, within BT0530 at 653.701 kb on + strand, within BT0530 at 653.706 kb on - strand, within BT0530 at 653.729 kb on + strand, within BT0530 at 653.730 kb on - strand, within BT0530 at 653.731 kb on + strand, within BT0530 at 653.732 kb on - strand, within BT0530 at 653.879 kb on + strand, within BT0530 at 653.973 kb on - strand, within BT0530 at 653.995 kb on - strand, within BT0530 at 654.154 kb on - strand, within BT0530 at 654.191 kb on + strand, within BT0530 at 654.248 kb on + strand at 654.250 kb on + strand at 654.251 kb on + strand at 654.275 kb on - strand at 654.293 kb on + strand at 654.296 kb on - strand at 654.416 kb on - strand, within BT0531 at 654.451 kb on + strand, within BT0531 at 654.541 kb on + strand, within BT0531 at 654.575 kb on - strand, within BT0531 at 654.688 kb on - strand, within BT0531 at 654.739 kb on + strand, within BT0531 at 654.999 kb on + strand at 655.000 kb on - strand at 655.011 kb on + strand at 655.250 kb on + strand at 655.333 kb on + strand, within BT0532 at 655.346 kb on + strand, within BT0532 at 655.363 kb on - strand, within BT0532 at 655.363 kb on - strand, within BT0532 at 655.797 kb on - strand, within BT0532 at 655.798 kb on + strand, within BT0532
Per-strain Table
Position Strand Gene LocusTag Fraction Amylopectin from Potato; autoclaved 2.5 mg/ml (C) remove 653,424 + BT0530 0.11 -4.0 653,451 - BT0530 0.14 -1.7 653,498 + BT0530 0.19 -3.4 653,609 + BT0530 0.30 +0.3 653,699 + BT0530 0.39 -1.3 653,700 - BT0530 0.39 -2.7 653,701 + BT0530 0.39 -1.7 653,701 + BT0530 0.39 -1.3 653,706 - BT0530 0.39 +0.3 653,729 + BT0530 0.42 -1.3 653,730 - BT0530 0.42 -0.7 653,731 + BT0530 0.42 -4.4 653,732 - BT0530 0.42 -0.7 653,879 + BT0530 0.57 -2.0 653,973 - BT0530 0.66 -2.0 653,995 - BT0530 0.68 -0.7 654,154 - BT0530 0.84 -0.7 654,191 + BT0530 0.88 -0.7 654,248 + -3.5 654,250 + -1.3 654,251 + -2.5 654,275 - -0.7 654,293 + -3.3 654,296 - -4.3 654,416 - BT0531 0.18 -0.3 654,451 + BT0531 0.24 -2.0 654,541 + BT0531 0.40 +0.3 654,575 - BT0531 0.46 -1.7 654,688 - BT0531 0.66 -1.5 654,739 + BT0531 0.75 -1.7 654,999 + -1.3 655,000 - -0.7 655,011 + -3.1 655,250 + +0.3 655,333 + BT0532 0.27 -4.9 655,346 + BT0532 0.28 -1.7 655,363 - BT0532 0.29 -2.0 655,363 - BT0532 0.29 +0.3 655,797 - BT0532 0.60 -3.7 655,798 + BT0532 0.60 -1.7
Or see this region's nucleotide sequence