Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0337
Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Amylopectin from Potato; autoclaved 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
401,088 | + | BT0336 | 0.43 | -1.7 | |
401,163 | + | BT0336 | 0.48 | -1.0 | |
401,226 | - | BT0336 | 0.52 | -2.3 | |
401,230 | - | BT0336 | 0.53 | +0.3 | |
401,356 | + | BT0336 | 0.61 | -1.2 | |
401,388 | + | BT0336 | 0.64 | -1.3 | |
401,457 | - | BT0336 | 0.68 | -0.9 | |
401,800 | - | +1.3 | |||
401,822 | - | +0.3 | |||
401,875 | - | -2.5 | |||
401,879 | - | -2.4 | |||
401,893 | - | +0.3 | |||
401,967 | - | -0.7 | |||
401,996 | - | -0.3 | |||
401,999 | + | -1.0 | |||
402,130 | - | BT0337 | 0.29 | -1.3 | |
402,146 | + | BT0337 | 0.32 | -1.3 | |
402,217 | - | BT0337 | 0.47 | -2.7 | |
402,366 | - | BT0337 | 0.78 | -1.3 | |
402,641 | - | -1.3 | |||
402,748 | + | -0.7 | |||
402,827 | - | -0.4 | |||
402,956 | - | -1.3 | |||
402,956 | - | -2.7 | |||
402,959 | + | -0.7 | |||
402,960 | - | -0.6 | |||
402,991 | - | +0.3 | |||
403,097 | - | -2.1 | |||
403,125 | - | +1.3 | |||
403,223 | + | -1.1 | |||
403,224 | - | +0.3 | |||
403,375 | - | -1.6 |
Or see this region's nucleotide sequence