Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0176

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
184,181	+		BT0175	0.70	+0.3
184,181	+		BT0175	0.70	-0.2
184,254	+		BT0175	0.88	+0.3
184,259	+		BT0175	0.90	-1.8
184,266	+				-0.7
184,291	-				-1.2
184,302	+				-0.5
184,416	-				-1.2
184,416	-				-1.5
184,417	+				-0.1
184,424	+				-1.2
184,426	+				+0.3
184,426	+				-1.2
184,427	-				-2.5
184,606	-				-1.4
184,612	+				-0.7
184,617	+				+0.3
184,618	-				-0.1
184,661	+				-2.0
184,712	-				-0.5
184,792	-				+1.9
184,792	-				-1.2
184,792	-				-0.2
184,811	-				+0.3
184,815	+				-0.1
184,832	+				+0.3
184,884	-				-1.2
185,006	-				-1.4
185,006	-				-0.7
185,010	-				-2.0
185,013	+				-2.2
185,013	+				-1.4
185,016	-				-0.9
185,030	-				-1.2
185,048	-				-1.0
185,050	-				-0.8
185,061	-				-1.1
185,121	-				-1.2
185,138	+		BT0176	0.13	-1.5
185,138	+		BT0176	0.13	-0.8
185,139	-		BT0176	0.13	-1.2
185,142	+		BT0176	0.14	-0.8
185,153	-		BT0176	0.16	-1.7
185,220	+		BT0176	0.30	-2.0
185,242	+		BT0176	0.35	-0.9
185,243	-		BT0176	0.35	-1.7
185,290	-		BT0176	0.44	+1.1
185,291	+		BT0176	0.45	-0.7
185,291	+		BT0176	0.45	-0.7
185,292	-		BT0176	0.45	-1.0
185,292	-		BT0176	0.45	-1.3
185,292	-		BT0176	0.45	-1.5
185,292	-		BT0176	0.45	-0.4
185,292	-		BT0176	0.45	-0.3
185,349	-		BT0176	0.56	-1.6
185,356	+		BT0176	0.58	-1.2
185,358	+		BT0176	0.58	-1.2
185,360	+		BT0176	0.59	-0.2
185,360	+		BT0176	0.59	+0.1
185,361	-		BT0176	0.59	+0.1
185,361	-		BT0176	0.59	-1.2
185,374	+		BT0176	0.62	-1.4
185,375	-		BT0176	0.62	-0.8
185,375	-		BT0176	0.62	-1.9
185,376	+		BT0176	0.62	-1.0
185,377	-		BT0176	0.62	-1.1
185,436	+		BT0176	0.74	-0.2
185,436	+		BT0176	0.74	-1.2
185,437	-		BT0176	0.74	-1.2
185,445	+		BT0176	0.76	-1.6
185,446	-		BT0176	0.76	-1.7
185,446	-		BT0176	0.76	-1.7
185,446	-		BT0176	0.76	-2.2
185,446	-		BT0176	0.76	+0.8
185,476	-		BT0176	0.82	-1.2
185,479	+				-0.7
185,479	+		BT0176	0.83	-0.9
185,479	+		BT0176	0.83	-1.6
185,479	+		BT0176	0.83	-1.0
185,479	+		BT0176	0.83	-1.2
185,480	-		BT0176	0.83	-1.1
185,480	-		BT0176	0.83	+1.3
185,480	-		BT0176	0.83	-1.8
185,484	-		BT0176	0.84	-1.2
185,517	+				-1.1
185,517	+				-0.9
185,518	-				-1.1
185,521	+				-0.9
185,522	-				-1.2
185,525	+				-1.2
185,526	-				-1.7
185,526	-				-0.7
185,554	+				-0.2
185,630	+				-0.7
185,727	+		BT0177	0.11	-1.7
185,770	+		BT0177	0.17	+0.3
185,918	+		BT0177	0.35	-0.7
185,949	+		BT0177	0.39	+0.3
186,016	+		BT0177	0.48	+1.3
186,033	+		BT0177	0.50	-2.0
186,088	+		BT0177	0.57	+0.3
186,108	+		BT0177	0.59	-0.7
186,160	+		BT0177	0.66	-1.2
186,160	+		BT0177	0.66	-2.0
186,318	+		BT0177	0.86	-0.2
186,449	+				+0.3
186,451	+				-1.7
186,545	+		BT0178	0.16	-0.2