Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1799

Experiment: (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
2,250,412	-		BT1798	0.29	-1.0
2,250,436	-		BT1798	0.30	-0.4
2,250,487	-		BT1798	0.34	-2.0
2,250,538	-		BT1798	0.38	-0.3
2,250,580	-		BT1798	0.41	-0.6
2,250,620	-		BT1798	0.44	+0.4
2,250,620	-		BT1798	0.44	-1.4
2,250,703	+		BT1798	0.50	-1.1
2,250,784	+		BT1798	0.56	-1.0
2,250,833	-		BT1798	0.60	+0.4
2,250,835	+		BT1798	0.60	-2.5
2,250,835	+		BT1798	0.60	-1.1
2,251,081	-		BT1798	0.78	+0.4
2,251,084	-		BT1798	0.79	-0.6
2,251,086	-		BT1798	0.79	-2.7
2,251,088	-		BT1798	0.79	-1.1
2,251,180	+		BT1798	0.86	-2.6
2,251,180	+		BT1798	0.86	-0.1
2,251,259	-				-1.4
2,251,321	+				+2.0
2,251,321	+				-1.8
2,251,426	+				-1.3
2,251,427	-				-0.7
2,251,492	+				-0.7
2,251,493	-				-2.9
2,251,493	-				-1.1
2,251,494	+				-1.1
2,251,494	+				-0.6
2,251,494	+				-0.6
2,251,495	-				-1.1
2,251,496	+				+0.4
2,251,497	-				+1.4
2,251,536	+				-0.9
2,251,578	+				-0.1
2,251,636	+				-0.1
2,251,744	-		BT1799	0.12	-1.0
2,251,919	+		BT1799	0.18	-1.4
2,251,926	+		BT1799	0.18	-1.1
2,251,926	+		BT1799	0.18	-0.6
2,251,969	-		BT1799	0.20	-0.9
2,251,969	-		BT1799	0.20	-2.0
2,252,029	-		BT1799	0.22	-1.0
2,252,084	-		BT1799	0.24	-1.1
2,252,142	-		BT1799	0.26	+1.4
2,252,143	+		BT1799	0.26	-0.1
2,252,153	+		BT1799	0.26	-2.6
2,252,153	+		BT1799	0.26	+0.4
2,252,154	-		BT1799	0.26	+0.4
2,252,154	-		BT1799	0.26	-0.6
2,252,154	-		BT1799	0.26	-1.2
2,252,155	-		BT1799	0.26	-1.7
2,252,178	-		BT1799	0.27	-0.9
2,252,216	+		BT1799	0.28	-1.0
2,252,270	-		BT1799	0.30	-1.3
2,252,273	+		BT1799	0.30	-1.1
2,252,374	+		BT1799	0.34	-1.9
2,252,375	-		BT1799	0.34	-0.9
2,252,382	-		BT1799	0.34	-0.9
2,252,408	+		BT1799	0.35	+0.4
2,252,408	+		BT1799	0.35	+0.4
2,252,409	-		BT1799	0.35	-1.4
2,252,633	+		BT1799	0.43	-1.4
2,252,652	+		BT1799	0.44	-0.6
2,252,653	-		BT1799	0.44	-1.6
2,252,653	-		BT1799	0.44	-1.4
2,252,721	+		BT1799	0.46	-1.6
2,252,731	-		BT1799	0.46	+0.4
2,252,798	-		BT1799	0.49	-1.9
2,252,798	-		BT1799	0.49	-1.3
2,252,824	-		BT1799	0.50	-0.3
2,252,871	-		BT1799	0.51	-1.1
2,252,931	+		BT1799	0.53	-1.6
2,252,932	-		BT1799	0.53	-1.1
2,253,032	+		BT1799	0.57	+0.1
2,253,098	+		BT1799	0.59	-1.4
2,253,099	-		BT1799	0.59	-0.6
2,253,113	+		BT1799	0.60	-1.6
2,253,140	+		BT1799	0.61	-0.6
2,253,156	+		BT1799	0.61	-1.5
2,253,157	-		BT1799	0.61	+1.4
2,253,216	+		BT1799	0.63	+0.4
2,253,421	-		BT1799	0.70	+0.4
2,253,424	+		BT1799	0.71	-1.1
2,253,424	+		BT1799	0.71	-0.6
2,253,462	-		BT1799	0.72	-1.4
2,253,520	-		BT1799	0.74	-0.6
2,253,525	+		BT1799	0.74	-2.4
2,253,526	-		BT1799	0.74	-1.0
2,253,536	+		BT1799	0.75	+0.1
2,253,593	+		BT1799	0.77	-0.1
2,253,750	+		BT1799	0.82	-1.1
2,253,755	+		BT1799	0.82	-2.7
2,253,767	+		BT1799	0.83	-1.1
2,253,771	+		BT1799	0.83	-0.8
2,253,772	-		BT1799	0.83	-0.6
2,253,772	-		BT1799	0.83	-2.5
2,253,772	-		BT1799	0.83	-0.1
2,253,772	-		BT1799	0.83	+0.4
2,253,772	-		BT1799	0.83	-1.9
2,253,772	-		BT1799	0.83	-0.6
2,253,774	-		BT1799	0.83	-0.7
2,253,775	+		BT1799	0.83	+1.4
2,253,799	+		BT1799	0.84	-3.5
2,253,817	-		BT1799	0.84	-0.6
2,253,825	+		BT1799	0.85	-0.6
2,253,969	+		BT1799	0.90	-0.4
2,254,024	-				-1.8
2,254,035	+				-0.1
2,254,036	-				-1.7
2,254,036	-				+0.4
2,254,100	-				-1.6
2,254,106	+				-1.7
2,254,107	-				-1.9
2,254,107	-				+0.4
2,254,186	+				+0.4
2,254,194	-				+1.4
2,254,284	+				-0.1
2,254,284	+				-0.9
2,254,284	+				-1.6
2,254,398	+				-0.3
2,254,459	+				-0.6
2,254,472	+				+0.4
2,254,478	-				+0.7
2,254,517	-				+1.4
2,254,520	+				+1.2
2,254,520	+				-1.6
2,254,521	-				-1.1
2,254,522	+				-1.9
2,254,524	+				+0.4
2,254,524	+				+0.6
2,254,534	+				-1.1
2,254,535	-				-0.6
2,254,535	-				+0.4
2,254,537	-				-1.4
2,254,615	-				+1.4
2,254,686	+				-1.0
2,254,688	-				-2.1
2,254,751	+		BT1800	0.13	-2.6
2,254,826	+		BT1800	0.17	+0.4
2,254,826	+		BT1800	0.17	-1.8
2,254,826	+		BT1800	0.17	-0.9
2,254,827	-		BT1800	0.17	+1.0
2,254,834	-		BT1800	0.18	+0.4
2,254,871	+		BT1800	0.20	-0.9
2,254,872	-		BT1800	0.20	+0.4
2,254,885	+		BT1800	0.21	-1.1
2,254,886	-		BT1800	0.21	-0.3
2,254,912	+		BT1800	0.22	-1.7
2,254,985	-		BT1800	0.26	-0.6
2,254,986	+		BT1800	0.26	-1.2
2,254,996	+		BT1800	0.27	+0.2
2,255,062	-		BT1800	0.30	-2.1
2,255,099	-		BT1800	0.32	-1.3
2,255,099	-		BT1800	0.32	+1.4
2,255,111	+		BT1800	0.33	-0.2
2,255,111	+		BT1800	0.33	-1.9
2,255,196	-		BT1800	0.37	-0.3
2,255,233	+		BT1800	0.39	-0.6
2,255,253	-		BT1800	0.40	-1.6
2,255,253	-		BT1800	0.40	-1.6