Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1737

Experiment: (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
2,139,922	-				-1.2
2,139,992	+				+2.0
2,140,009	+				+2.0
2,140,069	-		BT1736	0.15	-2.6
2,140,069	-		BT1736	0.15	-1.6
2,140,081	-		BT1736	0.17	+0.4
2,140,178	+		BT1736	0.35	-1.2
2,140,206	+		BT1736	0.40	-0.5
2,140,255	-		BT1736	0.49	-1.8
2,140,415	+		BT1736	0.78	-0.6
2,140,450	-		BT1736	0.85	+1.6
2,140,472	+		BT1736	0.89	+1.4
2,140,491	+				+0.4
2,140,492	-				-1.9
2,140,557	+				-1.7
2,140,557	+				+2.0
2,140,572	-				-0.6
2,140,605	-				-0.7
2,140,624	-				+0.4
2,140,658	+				-0.6
2,140,708	+				-0.6
2,140,715	-				-0.9
2,140,767	-				+0.4
2,140,770	+				-0.6
2,140,770	+				-0.6
2,140,775	+				-2.2
2,140,828	-		BT1737	0.12	-0.6
2,140,828	-		BT1737	0.12	-1.6
2,140,831	+		BT1737	0.13	-2.8
2,140,832	-		BT1737	0.13	-1.2
2,140,884	+		BT1737	0.16	-1.2
2,140,884	+		BT1737	0.16	+1.4
2,140,889	-		BT1737	0.16	-3.3
2,140,919	+		BT1737	0.18	+0.4
2,140,919	+		BT1737	0.18	+0.4
2,140,941	-		BT1737	0.20	+0.4
2,140,959	+		BT1737	0.21	-4.5
2,140,968	+		BT1737	0.22	-1.6
2,140,982	+		BT1737	0.23	-2.2
2,140,982	+		BT1737	0.23	-2.4
2,140,982	+		BT1737	0.23	-1.2
2,140,988	-		BT1737	0.23	+0.4
2,141,044	+		BT1737	0.27	-1.8
2,141,115	-		BT1737	0.31	-1.8
2,141,242	-		BT1737	0.40	-0.6
2,141,242	-		BT1737	0.40	-2.8
2,141,323	+		BT1737	0.45	-3.7
2,141,323	+		BT1737	0.45	-1.9
2,141,460	+		BT1737	0.54	-0.6
2,141,460	+		BT1737	0.54	-1.9
2,141,461	-		BT1737	0.54	-1.2
2,141,561	-		BT1737	0.61	-2.2
2,141,567	-				-1.2
2,141,589	+		BT1737	0.63	-0.2
2,141,590	-		BT1737	0.63	+0.4
2,141,590	-		BT1737	0.63	-1.9
2,141,630	+		BT1737	0.66	-0.6
2,141,680	+		BT1737	0.69	-3.1
2,141,711	-		BT1737	0.71	-1.2
2,141,711	-		BT1737	0.71	-1.6
2,141,899	+		BT1737	0.83	-1.6
2,142,063	-				-1.2
2,142,120	+				-1.9
2,142,123	+				-1.6
2,142,186	+				-1.8
2,142,202	+				+0.4
2,142,203	-				-0.2
2,142,465	+		BT1738	0.13	-0.9
2,142,486	+		BT1738	0.14	-2.1
2,142,571	-		BT1738	0.19	-0.6
2,142,616	+		BT1738	0.21	-1.4
2,142,641	-		BT1738	0.22	-2.2
2,142,664	-		BT1738	0.23	-0.7
2,142,692	-		BT1738	0.25	-0.6
2,142,693	+		BT1738	0.25	-0.8
2,142,725	+		BT1738	0.27	-0.0
2,142,756	-		BT1738	0.28	+0.4
2,142,849	+		BT1738	0.33	-2.8
2,142,940	-		BT1738	0.38	-2.4
2,142,940	-		BT1738	0.38	+0.1
2,142,942	-		BT1738	0.38	-0.6
2,142,968	-		BT1738	0.39	-1.2
2,143,000	+		BT1738	0.41	+0.8
2,143,003	-		BT1738	0.41	+0.6
2,143,078	+		BT1738	0.45	-1.0
2,143,128	+		BT1738	0.48	-1.2