Experiment: (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0604 and BT0605 are separated by 1 nucleotides BT0605 and BT0606 are separated by 60 nucleotides
BT0604: BT0604 - putative coenzyme F420-reducing hydrogenase (NCBI ptt file), at 745,425 to 746,612
BT0604
BT0605: BT0605 - putative polysaccharide export protein (NCBI ptt file), at 746,614 to 748,059
BT0605
BT0606: BT0606 - hypothetical protein (NCBI ptt file), at 748,120 to 749,340
BT0606
Position (kb) 746
747
748
749 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 745.626 kb on - strand, within BT0604 at 745.664 kb on + strand, within BT0604 at 745.682 kb on + strand, within BT0604 at 745.682 kb on + strand, within BT0604 at 745.683 kb on - strand, within BT0604 at 745.833 kb on - strand, within BT0604 at 745.839 kb on - strand, within BT0604 at 745.860 kb on - strand, within BT0604 at 746.109 kb on - strand, within BT0604 at 746.167 kb on - strand, within BT0604 at 746.167 kb on - strand, within BT0604 at 746.424 kb on - strand, within BT0604 at 746.545 kb on - strand at 746.570 kb on - strand at 746.601 kb on - strand at 746.690 kb on + strand at 746.691 kb on - strand at 746.699 kb on + strand at 746.711 kb on + strand at 746.716 kb on - strand at 746.749 kb on + strand at 746.838 kb on + strand, within BT0605 at 746.873 kb on + strand, within BT0605 at 746.915 kb on + strand, within BT0605 at 746.932 kb on + strand, within BT0605 at 746.935 kb on + strand, within BT0605 at 746.973 kb on + strand, within BT0605 at 746.976 kb on - strand, within BT0605 at 747.018 kb on - strand, within BT0605 at 747.106 kb on - strand, within BT0605 at 747.116 kb on - strand, within BT0605 at 747.149 kb on + strand, within BT0605 at 747.242 kb on + strand, within BT0605 at 747.295 kb on - strand, within BT0605 at 747.441 kb on - strand, within BT0605 at 747.616 kb on + strand, within BT0605 at 747.665 kb on - strand, within BT0605 at 747.665 kb on - strand, within BT0605 at 747.694 kb on + strand, within BT0605 at 747.822 kb on + strand, within BT0605 at 747.823 kb on - strand, within BT0605 at 747.894 kb on + strand, within BT0605 at 747.913 kb on + strand, within BT0605 at 747.914 kb on - strand, within BT0605 at 747.916 kb on - strand at 747.918 kb on - strand at 748.080 kb on - strand at 748.080 kb on - strand at 748.118 kb on - strand at 748.189 kb on + strand at 748.236 kb on - strand at 748.248 kb on - strand, within BT0606 at 748.309 kb on + strand, within BT0606 at 748.388 kb on + strand, within BT0606 at 748.393 kb on + strand, within BT0606 at 748.520 kb on - strand, within BT0606 at 748.646 kb on - strand, within BT0606 at 748.650 kb on - strand, within BT0606 at 748.679 kb on - strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.867 kb on - strand, within BT0606 at 748.871 kb on + strand, within BT0606 at 749.037 kb on + strand, within BT0606 at 749.038 kb on - strand, within BT0606
Per-strain Table
Position Strand Gene LocusTag Fraction (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) remove 745,626 - BT0604 0.17 -0.6 745,664 + BT0604 0.20 +0.4 745,682 + BT0604 0.22 -1.9 745,682 + BT0604 0.22 -0.6 745,683 - BT0604 0.22 -0.6 745,833 - BT0604 0.34 -1.8 745,839 - BT0604 0.35 +0.4 745,860 - BT0604 0.37 +2.0 746,109 - BT0604 0.58 -1.1 746,167 - BT0604 0.62 -0.6 746,167 - BT0604 0.62 -1.1 746,424 - BT0604 0.84 +0.4 746,545 - -0.6 746,570 - -1.1 746,601 - -1.0 746,690 + -0.4 746,691 - +1.4 746,699 + -1.1 746,711 + -1.6 746,716 - -1.1 746,749 + -2.4 746,838 + BT0605 0.15 +0.4 746,873 + BT0605 0.18 +1.4 746,915 + BT0605 0.21 -1.6 746,932 + BT0605 0.22 -1.6 746,935 + BT0605 0.22 +0.4 746,973 + BT0605 0.25 -3.0 746,976 - BT0605 0.25 -0.6 747,018 - BT0605 0.28 -1.9 747,106 - BT0605 0.34 -1.1 747,116 - BT0605 0.35 -1.1 747,149 + BT0605 0.37 +0.4 747,242 + BT0605 0.43 -1.6 747,295 - BT0605 0.47 -2.4 747,441 - BT0605 0.57 -1.1 747,616 + BT0605 0.69 -1.1 747,665 - BT0605 0.73 -1.9 747,665 - BT0605 0.73 -1.4 747,694 + BT0605 0.75 -3.1 747,822 + BT0605 0.84 +0.4 747,823 - BT0605 0.84 -1.6 747,894 + BT0605 0.89 -1.1 747,913 + BT0605 0.90 +0.4 747,914 - BT0605 0.90 -0.1 747,916 - -0.4 747,918 - -1.1 748,080 - +0.4 748,080 - +0.4 748,118 - +0.4 748,189 + -1.6 748,236 - -1.7 748,248 - BT0606 0.10 -1.6 748,309 + BT0606 0.15 -0.6 748,388 + BT0606 0.22 +0.4 748,393 + BT0606 0.22 -0.6 748,520 - BT0606 0.33 -0.6 748,646 - BT0606 0.43 -0.4 748,650 - BT0606 0.43 -1.6 748,679 - BT0606 0.46 -1.9 748,862 + BT0606 0.61 -1.6 748,862 + BT0606 0.61 +0.4 748,867 - BT0606 0.61 -1.0 748,871 + BT0606 0.62 -1.1 749,037 + BT0606 0.75 +0.4 749,038 - BT0606 0.75 +0.4
Or see this region's nucleotide sequence