Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1394

Experiment: (+)-Arabinogalactan; autoclaved 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 5 mg/ml (C)
1,720,707	+		BT1393	0.32	-1.0
1,720,773	-		BT1393	0.38	-0.0
1,720,792	-		BT1393	0.39	-1.1
1,720,792	-		BT1393	0.39	-0.1
1,720,815	+		BT1393	0.41	-1.6
1,720,829	+		BT1393	0.42	+1.0
1,720,893	-		BT1393	0.48	-1.5
1,720,926	-		BT1393	0.50	-0.0
1,720,978	-		BT1393	0.55	-2.0
1,721,042	-		BT1393	0.60	-2.5
1,721,124	-		BT1393	0.67	-1.3
1,721,218	+		BT1393	0.75	-1.0
1,721,317	-		BT1393	0.83	+1.0
1,721,457	+				-1.0
1,721,458	-				-1.0
1,721,574	-				-0.0
1,721,637	-				-1.0
1,721,641	+				-0.8
1,721,686	+				-0.0
1,721,687	-				-2.0
1,721,841	+		BT1394	0.47	-2.7
1,721,841	+		BT1394	0.47	-3.2
1,721,842	-		BT1394	0.47	-0.0
1,721,899	-		BT1394	0.62	-2.6
1,721,956	+		BT1394	0.76	+1.0
1,721,957	-		BT1394	0.77	-0.0
1,722,038	+				-2.1
1,722,202	-		BT1395	0.14	+0.6
1,722,293	-		BT1395	0.22	+1.6
1,722,296	-		BT1395	0.23	-1.9
1,722,418	+		BT1395	0.34	-0.6
1,722,608	-		BT1395	0.53	-0.0
1,722,614	-		BT1395	0.53	+1.0
1,722,638	-		BT1395	0.55	+1.0
1,722,670	+		BT1395	0.59	-1.0
1,722,708	+		BT1395	0.62	-0.6
1,722,804	+		BT1395	0.71	-2.8
1,722,880	+				-0.6