Experiment: Glycogen; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0606 and BT0607 are separated by 6 nucleotides BT0607 and BT0608 are separated by 96 nucleotides BT0608 and BT0609 are separated by 531 nucleotides
BT0606: BT0606 - hypothetical protein (NCBI ptt file), at 748,120 to 749,340
BT0606
BT0607: BT0607 - serine O-acetyltransferase (NCBI ptt file), at 749,347 to 749,922
BT0607
BT0608: BT0608 - glycosyltransferase (NCBI ptt file), at 750,019 to 751,098
BT0608
BT0609: BT0609 - glycosyltransferase (NCBI ptt file), at 751,630 to 752,769
BT0609
Position (kb) 750
751
752 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 749.037 kb on + strand, within BT0606 at 749.038 kb on - strand, within BT0606 at 749.089 kb on + strand, within BT0606 at 749.090 kb on - strand, within BT0606 at 749.193 kb on - strand, within BT0606 at 749.236 kb on - strand at 749.286 kb on - strand at 749.302 kb on - strand at 749.407 kb on - strand, within BT0607 at 749.442 kb on + strand, within BT0607 at 749.604 kb on + strand, within BT0607 at 749.605 kb on - strand, within BT0607 at 749.711 kb on + strand, within BT0607 at 749.712 kb on - strand, within BT0607 at 749.775 kb on - strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.807 kb on + strand, within BT0607 at 749.811 kb on + strand, within BT0607 at 749.820 kb on + strand, within BT0607 at 750.039 kb on + strand at 750.040 kb on - strand at 750.040 kb on - strand at 750.041 kb on + strand at 750.041 kb on + strand at 750.141 kb on + strand, within BT0608 at 750.201 kb on - strand, within BT0608 at 750.209 kb on + strand, within BT0608 at 750.268 kb on + strand, within BT0608 at 750.307 kb on + strand, within BT0608 at 750.316 kb on - strand, within BT0608 at 750.324 kb on + strand, within BT0608 at 750.325 kb on - strand at 750.423 kb on - strand, within BT0608 at 750.434 kb on + strand, within BT0608 at 750.434 kb on + strand, within BT0608 at 750.467 kb on + strand, within BT0608 at 750.511 kb on - strand, within BT0608 at 750.553 kb on - strand, within BT0608 at 750.738 kb on - strand, within BT0608 at 750.738 kb on - strand, within BT0608 at 750.769 kb on - strand, within BT0608 at 750.778 kb on + strand, within BT0608 at 750.837 kb on + strand, within BT0608 at 750.870 kb on + strand, within BT0608 at 751.081 kb on - strand at 751.150 kb on - strand at 751.299 kb on - strand at 751.442 kb on - strand at 751.442 kb on - strand at 751.588 kb on + strand at 751.621 kb on + strand at 751.673 kb on - strand at 751.767 kb on - strand, within BT0609 at 751.841 kb on - strand, within BT0609 at 751.847 kb on - strand, within BT0609 at 751.881 kb on + strand, within BT0609 at 751.955 kb on + strand, within BT0609 at 751.995 kb on + strand, within BT0609 at 752.065 kb on - strand, within BT0609 at 752.083 kb on - strand, within BT0609
Per-strain Table
Position Strand Gene LocusTag Fraction Glycogen; filtered 2.5 mg/ml (C) remove 749,037 + BT0606 0.75 +0.0 749,038 - BT0606 0.75 +0.6 749,089 + BT0606 0.79 -2.3 749,090 - BT0606 0.79 -2.8 749,193 - BT0606 0.88 -1.0 749,236 - +1.0 749,286 - -0.5 749,302 - -1.0 749,407 - BT0607 0.10 -3.1 749,442 + BT0607 0.16 -1.5 749,604 + BT0607 0.45 +0.0 749,605 - BT0607 0.45 -2.0 749,711 + BT0607 0.63 -1.0 749,712 - BT0607 0.63 -2.3 749,775 - BT0607 0.74 +0.0 749,789 + BT0607 0.77 +0.0 749,789 + BT0607 0.77 -1.5 749,807 + BT0607 0.80 -2.5 749,811 + BT0607 0.81 -1.5 749,820 + BT0607 0.82 +0.0 750,039 + +0.0 750,040 - -1.5 750,040 - +1.0 750,041 + +0.0 750,041 + +1.0 750,141 + BT0608 0.11 -1.5 750,201 - BT0608 0.17 -0.9 750,209 + BT0608 0.18 -1.0 750,268 + BT0608 0.23 -1.3 750,307 + BT0608 0.27 -1.3 750,316 - BT0608 0.28 -2.0 750,324 + BT0608 0.28 -2.0 750,325 - -2.3 750,423 - BT0608 0.37 +0.0 750,434 + BT0608 0.38 -1.5 750,434 + BT0608 0.38 +1.0 750,467 + BT0608 0.41 -3.0 750,511 - BT0608 0.46 +0.0 750,553 - BT0608 0.49 -1.0 750,738 - BT0608 0.67 -2.5 750,738 - BT0608 0.67 -3.4 750,769 - BT0608 0.69 +0.0 750,778 + BT0608 0.70 -2.0 750,837 + BT0608 0.76 -1.5 750,870 + BT0608 0.79 -0.8 751,081 - -1.9 751,150 - +0.0 751,299 - -1.0 751,442 - -2.0 751,442 - +0.0 751,588 + +1.0 751,621 + -1.0 751,673 - -2.3 751,767 - BT0609 0.12 -2.3 751,841 - BT0609 0.19 -1.8 751,847 - BT0609 0.19 -0.8 751,881 + BT0609 0.22 +1.0 751,955 + BT0609 0.29 -2.5 751,995 + BT0609 0.32 -2.0 752,065 - BT0609 0.38 -1.5 752,083 - BT0609 0.40 -1.7
Or see this region's nucleotide sequence