Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3021

Experiment: Glycogen; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycogen; filtered 2.5 mg/ml (C)
3,819,979	-		BT3020	0.45	+1.0
3,820,058	-		BT3020	0.50	-2.0
3,820,141	+		BT3020	0.55	-1.0
3,820,142	-		BT3020	0.56	-1.4
3,820,177	-		BT3020	0.58	-2.0
3,820,177	-		BT3020	0.58	+0.2
3,820,210	-		BT3020	0.60	-1.6
3,820,231	+		BT3020	0.61	-0.0
3,820,473	-		BT3020	0.77	+0.6
3,820,473	-		BT3020	0.77	+2.0
3,820,486	+		BT3020	0.78	-2.1
3,820,563	+		BT3020	0.83	-1.4
3,820,563	+		BT3020	0.83	-0.0
3,820,564	-		BT3020	0.83	-0.4
3,820,570	+		BT3020	0.83	-2.0
3,820,583	+		BT3020	0.84	-1.0
3,820,583	+		BT3020	0.84	-0.2
3,820,584	-		BT3020	0.84	-0.0
3,820,611	+		BT3020	0.86	-1.4
3,820,611	+		BT3020	0.86	-1.3
3,820,654	-		BT3020	0.89	+1.0
3,820,716	+				-3.4
3,820,719	-				-1.3
3,820,719	-				-1.1
3,820,748	-				-1.6
3,820,823	-				-0.8
3,820,837	+				-0.0
3,820,837	+				-1.0
3,820,854	+				-0.0
3,820,861	-				-2.0
3,820,883	+				-2.6
3,820,925	+				-1.5
3,820,936	-				-0.0
3,820,953	-				-1.2
3,820,953	-				-0.0
3,820,971	-				-1.4
3,821,042	+				+0.5
3,821,042	+				-1.4
3,821,048	+				-0.0
3,821,074	+				-0.4
3,821,074	+				-0.0
3,821,075	-				-1.6
3,821,102	+				-0.0
3,821,102	+				+1.0
3,821,103	-				-1.4
3,821,105	+				-0.5
3,821,210	+		BT3021	0.18	-0.6
3,821,210	+		BT3021	0.18	+1.6
3,821,211	-		BT3021	0.18	+1.0
3,821,213	+		BT3021	0.18	-1.1
3,821,247	+		BT3021	0.20	-1.6
3,821,247	+		BT3021	0.20	+1.6
3,821,248	-		BT3021	0.20	-1.0
3,821,248	-		BT3021	0.20	+0.8
3,821,416	+		BT3021	0.33	-0.7
3,821,421	+		BT3021	0.33	-0.0
3,821,422	-		BT3021	0.33	-0.0
3,821,429	+		BT3021	0.34	+0.3
3,821,522	-		BT3021	0.41	-1.0
3,821,531	+		BT3021	0.41	+0.6
3,821,567	-		BT3021	0.44	-1.4
3,821,610	+		BT3021	0.47	-0.0
3,821,681	-		BT3021	0.52	-1.0
3,821,681	-		BT3021	0.52	-0.8
3,821,708	+		BT3021	0.54	-0.0
3,821,719	+		BT3021	0.55	-3.5
3,821,723	+		BT3021	0.56	-1.2
3,821,723	+		BT3021	0.56	+1.2
3,821,737	+		BT3021	0.57	+0.2
3,821,776	-		BT3021	0.59	-2.0
3,821,786	+		BT3021	0.60	-0.4
3,821,793	+		BT3021	0.61	-1.5
3,821,793	+		BT3021	0.61	-0.0
3,821,793	+		BT3021	0.61	-1.0
3,821,794	-		BT3021	0.61	-0.4
3,821,794	-		BT3021	0.61	+0.6
3,821,794	-		BT3021	0.61	+1.0
3,821,797	+		BT3021	0.61	-0.4
3,821,797	+		BT3021	0.61	-0.6
3,821,798	-		BT3021	0.61	+0.4
3,821,798	-		BT3021	0.61	-1.1
3,821,800	-		BT3021	0.61	-0.7
3,821,801	+		BT3021	0.61	-0.1
3,821,801	+		BT3021	0.61	-0.0
3,821,802	-		BT3021	0.61	-1.4
3,821,802	-		BT3021	0.61	+0.6
3,821,816	+		BT3021	0.62	-1.0
3,821,817	-		BT3021	0.62	+1.0
3,821,938	-		BT3021	0.71	-0.7
3,821,961	+		BT3021	0.73	+1.6
3,821,968	+		BT3021	0.74	-0.0
3,821,993	+		BT3021	0.75	-0.6
3,821,993	+		BT3021	0.75	+0.6
3,821,993	+		BT3021	0.75	-1.3
3,822,033	-		BT3021	0.78	-1.6
3,822,078	+		BT3021	0.82	-0.5
3,822,106	-		BT3021	0.84	+0.2
3,822,106	-		BT3021	0.84	-1.6
3,822,106	-		BT3021	0.84	-1.4
3,822,163	+		BT3021	0.88	-0.4
3,822,163	+		BT3021	0.88	-1.3
3,822,164	-		BT3021	0.88	-1.2
3,822,169	-		BT3021	0.88	-0.2
3,822,171	+		BT3021	0.89	-1.6
3,822,185	-		BT3021	0.90	-0.4
3,822,185	-		BT3021	0.90	-1.1
3,822,310	+				-1.6
3,822,315	+				-0.0
3,822,342	-				-0.0
3,822,342	-				-0.8
3,822,436	-		BT3022	0.19	+1.0
3,822,451	-		BT3022	0.27	-1.8
3,822,527	+		BT3022	0.67	-0.0
3,822,643	-				-0.0
3,822,647	+				-1.5
3,822,647	+				-0.0
3,822,647	+				-1.7
3,822,648	-				-0.0
3,822,660	+				-0.6
3,822,664	+				-0.5
3,822,706	-				-0.0
3,822,706	-				-0.0
3,822,736	+				+0.7
3,822,769	-				-0.0
3,822,865	-				-1.0
3,822,872	-				-0.4
3,822,874	+				-1.0
3,822,875	-				-1.3
3,822,880	-				-0.7
3,822,880	-				-0.7
3,822,895	-				-0.6
3,822,906	-				-1.6
3,822,906	-				-1.6
3,822,921	+				-1.6
3,822,957	+				-1.0
3,822,963	+				-1.4
3,822,963	+				-0.7
3,822,965	+				-0.4
3,822,966	-				-0.5
3,822,970	-				+1.6
3,822,970	-				-0.7
3,822,984	+				+1.6
3,822,985	-				-1.0
3,823,011	+				-0.9
3,823,071	+		BT3023	0.10	-1.1
3,823,071	+		BT3023	0.10	-4.2
3,823,071	+		BT3023	0.10	+1.0
3,823,072	-		BT3023	0.10	-1.3
3,823,132	-		BT3023	0.17	-0.7
3,823,132	-		BT3023	0.17	-1.4
3,823,168	+		BT3023	0.21	-0.4
3,823,168	+		BT3023	0.21	+0.8
3,823,168	+		BT3023	0.21	-0.6
3,823,169	-		BT3023	0.21	-1.0
3,823,304	+		BT3023	0.35	-0.9
3,823,308	+		BT3023	0.36	-0.8
3,823,317	+		BT3023	0.37	-0.0