Experiment: Glycogen; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0282 and BT0283 are separated by 15 nucleotides BT0283 and BT0284 are separated by 45 nucleotides BT0284 and BT0285 are separated by 229 nucleotides
BT0282: BT0282 - conserved hypothetical protein (NCBI ptt file), at 326,951 to 328,246
BT0282
BT0283: BT0283 - hypothetical protein (NCBI ptt file), at 328,262 to 328,447
BT0283
BT0284: BT0284 - putative peptidoglycan binding protein (LPXTG motif) (NCBI ptt file), at 328,493 to 329,944
BT0284
BT0285: BT0285 - putative tolQ-type transport protein (NCBI ptt file), at 330,174 to 331,592
BT0285
Position (kb) 328
329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 327.555 kb on - strand, within BT0282 at 327.558 kb on + strand, within BT0282 at 327.559 kb on - strand, within BT0282 at 327.646 kb on - strand, within BT0282 at 327.767 kb on + strand, within BT0282 at 327.798 kb on + strand, within BT0282 at 327.799 kb on - strand, within BT0282 at 327.866 kb on - strand, within BT0282 at 327.911 kb on + strand, within BT0282 at 327.912 kb on - strand, within BT0282 at 328.016 kb on + strand, within BT0282 at 328.176 kb on + strand at 328.177 kb on - strand at 328.208 kb on - strand at 328.208 kb on - strand at 328.451 kb on - strand at 328.555 kb on - strand at 328.573 kb on + strand at 328.635 kb on + strand at 328.635 kb on + strand at 328.705 kb on - strand, within BT0284 at 328.715 kb on - strand, within BT0284 at 328.789 kb on - strand, within BT0284 at 328.822 kb on + strand, within BT0284 at 328.822 kb on + strand, within BT0284 at 328.907 kb on - strand at 328.942 kb on + strand, within BT0284 at 328.943 kb on - strand, within BT0284 at 328.998 kb on + strand, within BT0284 at 328.998 kb on + strand at 329.009 kb on + strand, within BT0284 at 329.022 kb on + strand, within BT0284 at 329.022 kb on + strand, within BT0284 at 329.044 kb on + strand, within BT0284 at 329.125 kb on + strand, within BT0284 at 329.126 kb on - strand, within BT0284 at 329.171 kb on - strand, within BT0284 at 329.173 kb on - strand, within BT0284 at 329.209 kb on + strand, within BT0284 at 329.282 kb on - strand, within BT0284 at 329.339 kb on - strand, within BT0284 at 329.587 kb on + strand, within BT0284 at 329.596 kb on + strand, within BT0284 at 329.597 kb on - strand, within BT0284 at 329.598 kb on + strand, within BT0284 at 329.600 kb on + strand, within BT0284 at 329.623 kb on + strand, within BT0284 at 329.623 kb on + strand, within BT0284 at 329.623 kb on + strand, within BT0284 at 329.626 kb on + strand, within BT0284 at 329.733 kb on + strand, within BT0284 at 329.737 kb on + strand, within BT0284 at 329.738 kb on - strand, within BT0284 at 329.818 kb on + strand at 329.842 kb on - strand at 329.849 kb on - strand at 329.894 kb on + strand at 329.895 kb on - strand at 329.896 kb on + strand at 329.900 kb on + strand at 329.901 kb on - strand at 329.960 kb on + strand at 329.961 kb on - strand at 330.006 kb on - strand at 330.011 kb on + strand at 330.012 kb on - strand at 330.238 kb on + strand at 330.378 kb on + strand, within BT0285 at 330.404 kb on - strand, within BT0285 at 330.491 kb on + strand, within BT0285 at 330.597 kb on - strand, within BT0285 at 330.642 kb on - strand, within BT0285 at 330.688 kb on + strand, within BT0285 at 330.710 kb on + strand, within BT0285 at 330.711 kb on - strand, within BT0285 at 330.711 kb on - strand, within BT0285 at 330.796 kb on + strand, within BT0285 at 330.872 kb on - strand, within BT0285 at 330.890 kb on + strand, within BT0285 at 330.890 kb on + strand, within BT0285 at 330.941 kb on + strand, within BT0285
Per-strain Table
Position Strand Gene LocusTag Fraction Glycogen; filtered 2.5 mg/ml (C) remove 327,555 - BT0282 0.47 -0.0 327,558 + BT0282 0.47 -0.8 327,559 - BT0282 0.47 -2.6 327,646 - BT0282 0.54 -1.6 327,767 + BT0282 0.63 -1.0 327,798 + BT0282 0.65 +1.5 327,799 - BT0282 0.65 -0.0 327,866 - BT0282 0.71 -1.4 327,911 + BT0282 0.74 -2.0 327,912 - BT0282 0.74 -0.6 328,016 + BT0282 0.82 -1.7 328,176 + -1.3 328,177 - -0.4 328,208 - +2.0 328,208 - +1.5 328,451 - -1.0 328,555 - -1.5 328,573 + -1.0 328,635 + -1.0 328,635 + -0.0 328,705 - BT0284 0.15 -0.0 328,715 - BT0284 0.15 -2.4 328,789 - BT0284 0.20 -3.0 328,822 + BT0284 0.23 +1.0 328,822 + BT0284 0.23 +1.0 328,907 - -0.0 328,942 + BT0284 0.31 -3.0 328,943 - BT0284 0.31 -0.0 328,998 + BT0284 0.35 +1.0 328,998 + -0.6 329,009 + BT0284 0.36 -2.0 329,022 + BT0284 0.36 -1.6 329,022 + BT0284 0.36 -2.4 329,044 + BT0284 0.38 -2.7 329,125 + BT0284 0.44 +1.0 329,126 - BT0284 0.44 +0.3 329,171 - BT0284 0.47 -0.0 329,173 - BT0284 0.47 -0.5 329,209 + BT0284 0.49 -1.8 329,282 - BT0284 0.54 -3.0 329,339 - BT0284 0.58 -0.0 329,587 + BT0284 0.75 -1.0 329,596 + BT0284 0.76 -2.4 329,597 - BT0284 0.76 -1.6 329,598 + BT0284 0.76 -1.1 329,600 + BT0284 0.76 -2.2 329,623 + BT0284 0.78 -1.7 329,623 + BT0284 0.78 -1.4 329,623 + BT0284 0.78 -1.0 329,626 + BT0284 0.78 -1.6 329,733 + BT0284 0.85 -1.4 329,737 + BT0284 0.86 +0.5 329,738 - BT0284 0.86 -0.0 329,818 + -1.4 329,842 - +1.0 329,849 - -1.5 329,894 + -2.4 329,895 - -0.0 329,896 + -1.0 329,900 + -1.1 329,901 - -0.8 329,960 + -0.4 329,961 - -0.0 330,006 - -1.0 330,011 + -2.4 330,012 - -0.0 330,238 + -1.0 330,378 + BT0285 0.14 -1.0 330,404 - BT0285 0.16 +1.5 330,491 + BT0285 0.22 -0.9 330,597 - BT0285 0.30 +0.4 330,642 - BT0285 0.33 +0.4 330,688 + BT0285 0.36 -0.0 330,710 + BT0285 0.38 -1.6 330,711 - BT0285 0.38 -1.4 330,711 - BT0285 0.38 -1.0 330,796 + BT0285 0.44 +1.0 330,872 - BT0285 0.49 -1.5 330,890 + BT0285 0.50 -0.6 330,890 + BT0285 0.50 -2.4 330,941 + BT0285 0.54 -0.0
Or see this region's nucleotide sequence