Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4384

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,776,917	-		BT4383	0.81	+0.6
5,776,974	+		BT4383	0.84	-0.8
5,776,975	-		BT4383	0.84	+0.8
5,777,062	+				+0.2
5,777,165	-				-0.2
5,777,167	-				+0.2
5,777,223	+				-1.0
5,777,389	-				-2.1
5,777,531	-				-1.2
5,777,572	+				-1.8
5,777,645	-				+1.2
5,777,645	-				-1.1
5,777,716	+				+0.2
5,777,720	+				-0.8
5,777,720	+				+0.2
5,777,725	+				-0.1
5,777,730	+				-1.6
5,777,730	+				-2.1
5,777,731	-				+5.3
5,777,732	+				-1.4
5,777,752	+				-1.8
5,777,753	-				-1.1
5,777,793	+				-0.8
5,777,923	+		BT4384	0.23	-1.3
5,777,945	+		BT4384	0.33	-0.7
5,777,945	+		BT4384	0.33	-1.4
5,778,115	+				+0.6
5,778,157	-				+0.2
5,778,236	+				+0.2
5,778,283	-				-1.4
5,778,365	-				+0.2
5,778,385	-				-0.8
5,778,440	-				-0.8
5,778,448	+		BT4385	0.10	-0.8
5,778,448	+		BT4385	0.10	+1.8
5,778,594	+		BT4385	0.20	-0.0
5,778,594	+		BT4385	0.20	-2.3
5,778,620	-		BT4385	0.21	-0.4
5,778,660	+				-1.8
5,778,693	-		BT4385	0.26	-1.1
5,778,693	-		BT4385	0.26	-0.4
5,778,728	-		BT4385	0.28	-1.3
5,778,740	-		BT4385	0.29	-1.4
5,778,740	-		BT4385	0.29	-2.4
5,778,889	-		BT4385	0.39	+0.2
5,778,999	+		BT4385	0.46	-0.4
5,779,014	+		BT4385	0.47	+0.8
5,779,063	+		BT4385	0.50	-0.8
5,779,064	-		BT4385	0.50	+0.2