Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4045

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,261,220	+				+0.1
5,261,220	+				-0.3
5,261,251	+				+0.2
5,261,291	-				+0.2
5,261,296	+				-3.1
5,261,296	+				-1.1
5,261,296	+				-2.1
5,261,297	-				-0.8
5,261,503	-		BT4045	0.15	-0.8
5,261,542	+		BT4045	0.17	-1.4
5,261,543	-		BT4045	0.17	-0.9
5,261,548	+		BT4045	0.18	-0.8
5,261,549	-		BT4045	0.18	-0.8
5,261,585	+		BT4045	0.20	-0.9
5,261,587	+		BT4045	0.20	-1.8
5,261,587	+		BT4045	0.20	-0.8
5,261,588	-		BT4045	0.20	-4.6
5,261,650	-		BT4045	0.25	+0.2
5,261,650	-		BT4045	0.25	+0.2
5,261,667	+				+0.2
5,261,739	-		BT4045	0.31	+0.2
5,261,739	-		BT4045	0.31	+0.2
5,261,769	+		BT4045	0.33	-0.9
5,261,820	-		BT4045	0.36	-0.7
5,261,839	+		BT4045	0.38	+0.2
5,261,839	+		BT4045	0.38	-0.8
5,261,865	-		BT4045	0.39	-1.8
5,261,866	+		BT4045	0.39	-1.8
5,261,866	+		BT4045	0.39	+1.2
5,261,866	+		BT4045	0.39	-0.4
5,261,867	-		BT4045	0.40	+0.2
5,261,875	-		BT4045	0.40	-1.8
5,261,903	-		BT4045	0.42	-0.8
5,262,014	+		BT4045	0.50	-1.4
5,262,049	+		BT4045	0.52	+0.4
5,262,050	-		BT4045	0.52	-0.8
5,262,290	-		BT4045	0.69	-0.8
5,262,293	-		BT4045	0.69	-1.4
5,262,338	-		BT4045	0.72	+0.6
5,262,358	+		BT4045	0.73	-1.4
5,262,397	+		BT4045	0.76	-0.2
5,262,397	+		BT4045	0.76	-1.3
5,262,398	-		BT4045	0.76	-3.4
5,262,400	+		BT4045	0.76	-0.4
5,262,410	+		BT4045	0.77	+0.2
5,262,410	+		BT4045	0.77	-2.0
5,262,442	+		BT4045	0.79	+0.2
5,262,443	-		BT4045	0.79	-1.4
5,262,443	-		BT4045	0.79	-1.3
5,262,443	-		BT4045	0.79	+0.2
5,262,476	+		BT4045	0.81	-1.3
5,262,508	+		BT4045	0.83	-0.8
5,262,508	+		BT4045	0.83	-1.4
5,262,508	+		BT4045	0.83	-1.8
5,262,509	-		BT4045	0.84	+0.2
5,262,571	-		BT4045	0.88	+0.2
5,262,596	-		BT4045	0.90	+0.2
5,262,608	-				-1.1
5,262,765	+				-1.8
5,262,768	-				-1.3
5,262,769	+				-0.8
5,262,770	-				-2.4
5,262,772	+				-0.6
5,262,777	-				-0.4
5,262,859	-				-1.4
5,262,935	+				-0.8
5,263,087	+				-1.9
5,263,211	-				+0.5
5,263,240	+				-1.1
5,263,240	+				-2.5
5,263,240	+				-3.2
5,263,241	-				-1.9
5,263,241	-				-1.4
5,263,244	+				+0.2
5,263,310	-				-2.6
5,263,333	-				-3.6
5,263,726	-		BT4046	0.25	+0.2