Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2936

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,692,261	+		BT2935	0.10	-0.5
3,692,317	+		BT2935	0.15	-1.0
3,692,382	+		BT2935	0.21	-1.7
3,692,398	+		BT2935	0.23	-1.7
3,692,408	+		BT2935	0.24	-1.3
3,692,480	+		BT2935	0.30	-0.5
3,692,480	+		BT2935	0.30	-1.5
3,692,509	+		BT2935	0.33	+0.3
3,692,542	+		BT2935	0.36	-0.7
3,692,582	+		BT2935	0.39	-0.8
3,692,663	+		BT2935	0.47	-1.8
3,692,798	+		BT2935	0.59	-2.3
3,692,832	+		BT2935	0.62	-2.0
3,692,855	+		BT2935	0.64	-2.9
3,692,876	-		BT2935	0.66	+0.3
3,692,938	-		BT2935	0.72	+0.3
3,692,968	+		BT2935	0.74	-0.3
3,693,011	+		BT2935	0.78	-0.6
3,693,084	-		BT2935	0.85	-2.3
3,693,245	+				-1.3
3,693,298	+				-1.1
3,693,299	-				-2.2
3,693,300	+				+0.3
3,693,300	+				-2.0
3,693,301	-				-1.7
3,693,301	-				-0.7
3,693,301	-				+1.9
3,693,318	+				-0.7
3,693,533	+		BT2936	0.25	+1.9
3,693,534	-		BT2936	0.25	-0.7
3,693,536	+		BT2936	0.25	-0.1
3,693,604	+		BT2936	0.30	-0.7
3,693,623	-		BT2936	0.32	-1.3
3,693,632	-		BT2936	0.33	-0.7
3,693,632	-		BT2936	0.33	-1.3
3,693,633	+		BT2936	0.33	-1.8
3,693,633	+		BT2936	0.33	-1.0
3,693,633	+		BT2936	0.33	-1.7
3,693,644	-		BT2936	0.34	-0.3
3,693,782	-		BT2936	0.45	+0.3
3,693,812	+		BT2936	0.48	-1.7
3,694,118	+		BT2936	0.73	-1.2
3,694,152	-		BT2936	0.76	-1.7
3,694,196	+		BT2936	0.80	-0.9
3,694,292	-		BT2936	0.88	-3.4
3,694,301	-		BT2936	0.89	-1.3
3,694,301	-		BT2936	0.89	-0.5
3,694,442	+				-1.3
3,694,450	+				-1.5
3,694,451	-				+0.3
3,694,462	+				-1.3
3,694,482	+				-2.0
3,694,558	+		BT2937	0.11	-0.4
3,694,645	+		BT2937	0.19	+0.3
3,694,745	+		BT2937	0.27	-1.3
3,694,900	+		BT2937	0.41	-0.3
3,694,901	-		BT2937	0.41	-2.4
3,695,044	+		BT2937	0.54	-1.0
3,695,260	+		BT2937	0.73	-0.7
3,695,353	+		BT2937	0.81	-1.5