Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2511

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,134,439	-		BT2510	0.10	-1.5
3,134,448	+		BT2510	0.11	+1.3
3,134,492	-		BT2510	0.15	-1.8
3,134,492	-		BT2510	0.15	-0.1
3,134,494	-		BT2510	0.16	+1.0
3,134,494	-		BT2510	0.16	+0.3
3,134,528	+		BT2510	0.19	-1.0
3,134,565	+		BT2510	0.23	-0.8
3,134,565	+		BT2510	0.23	-0.7
3,134,567	+		BT2510	0.23	+0.8
3,134,573	-		BT2510	0.24	-0.5
3,134,573	-		BT2510	0.24	-0.6
3,134,687	-		BT2510	0.35	-0.7
3,134,694	-		BT2510	0.36	-2.3
3,134,694	-		BT2510	0.36	-2.1
3,134,720	+		BT2510	0.38	-3.5
3,134,743	+		BT2510	0.41	-2.6
3,134,743	+		BT2510	0.41	+0.5
3,134,743	+		BT2510	0.41	+0.3
3,134,746	-		BT2510	0.41	-1.7
3,134,824	-		BT2510	0.49	-2.3
3,134,832	-		BT2510	0.49	-0.1
3,134,861	+		BT2510	0.52	+0.3
3,134,861	+		BT2510	0.52	-1.0
3,134,862	-		BT2510	0.52	+0.5
3,134,862	-		BT2510	0.52	+0.3
3,134,948	+		BT2510	0.61	-1.2
3,134,981	-		BT2510	0.64	-2.3
3,134,995	+		BT2510	0.66	-0.2
3,134,996	-		BT2510	0.66	-2.9
3,135,011	+		BT2510	0.67	-0.7
3,135,116	+		BT2510	0.78	-0.7
3,135,116	+		BT2510	0.78	+0.5
3,135,117	-		BT2510	0.78	-1.7
3,135,120	+		BT2510	0.78	-1.5
3,135,120	+		BT2510	0.78	-1.1
3,135,120	+		BT2510	0.78	-2.0
3,135,159	-		BT2510	0.82	-0.7
3,135,173	+		BT2510	0.83	-1.0
3,135,189	-				-0.7
3,135,192	+		BT2510	0.85	-1.3
3,135,193	-		BT2510	0.85	-1.5
3,135,193	-		BT2510	0.85	-2.1
3,135,243	+				-1.8
3,135,336	+				-2.0
3,135,352	+				-0.7
3,135,353	-				-1.7
3,135,357	+				-1.5
3,135,410	+				+1.3
3,135,472	-				-1.4
3,135,475	-				+0.3
3,135,489	-		BT2511	0.12	-0.5
3,135,527	+		BT2511	0.21	-0.7
3,135,628	+		BT2511	0.45	-2.0
3,135,629	-		BT2511	0.45	-1.3
3,135,654	+		BT2511	0.51	-0.6
3,135,659	+		BT2511	0.53	+0.3
3,135,660	-		BT2511	0.53	-0.9
3,135,660	-		BT2511	0.53	-1.0
3,135,663	+		BT2511	0.54	-2.0
3,135,702	+		BT2511	0.63	-0.3
3,135,703	-		BT2511	0.63	+1.3
3,135,703	-		BT2511	0.63	-0.4
3,135,704	+		BT2511	0.63	-2.0
3,135,705	-		BT2511	0.64	-1.1
3,135,705	-		BT2511	0.64	-1.9
3,135,713	+		BT2511	0.65	-0.7
3,135,870	+				-1.4
3,135,883	-				+0.3
3,135,889	-				+0.3
3,135,902	+				+1.3
3,135,903	-				-0.5
3,135,903	-				-2.0
3,135,951	-				-2.4
3,136,020	+				+2.6
3,136,109	+		BT2512	0.13	+0.3
3,136,126	-		BT2512	0.13	-1.7
3,136,126	-		BT2512	0.13	-0.3
3,136,143	-		BT2512	0.14	+0.3
3,136,146	+		BT2512	0.14	-1.2
3,136,146	+		BT2512	0.14	+0.3
3,136,147	-		BT2512	0.14	-0.7
3,136,151	+		BT2512	0.15	-0.4
3,136,214	+		BT2512	0.18	-1.9
3,136,214	+		BT2512	0.18	-2.7
3,136,215	-		BT2512	0.18	-0.7
3,136,304	+		BT2512	0.22	+1.3
3,136,305	-		BT2512	0.23	-0.9
3,136,313	+		BT2512	0.23	-2.0
3,136,314	-		BT2512	0.23	-0.3
3,136,314	-		BT2512	0.23	-0.3
3,136,332	+		BT2512	0.24	-1.7
3,136,336	-		BT2512	0.24	-0.7
3,136,336	-		BT2512	0.24	-1.9
3,136,413	+		BT2512	0.28	-0.7
3,136,429	+		BT2512	0.29	-1.7
3,136,430	-		BT2512	0.29	-0.5
3,136,460	+		BT2512	0.30	-0.1
3,136,460	+		BT2512	0.30	+0.3
3,136,466	+		BT2512	0.31	+0.3
3,136,523	+		BT2512	0.34	+0.3
3,136,577	-		BT2512	0.36	-1.0
3,136,577	-		BT2512	0.36	-1.2
3,136,583	+		BT2512	0.37	-1.7
3,136,583	+		BT2512	0.37	-0.2
3,136,627	+		BT2512	0.39	-1.3
3,136,644	-		BT2512	0.40	-1.9
3,136,658	+		BT2512	0.41	+0.3
3,136,658	+		BT2512	0.41	-1.8
3,136,658	+		BT2512	0.41	-1.4
3,136,671	+		BT2512	0.41	-0.9
3,136,785	-		BT2512	0.47	-0.7
3,136,788	-		BT2512	0.47	-1.7
3,136,810	+		BT2512	0.48	-1.3