Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2498

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,120,063	+		BT2497	0.13	-1.7
3,120,069	-		BT2497	0.14	-0.5
3,120,069	-		BT2497	0.14	-1.1
3,120,141	-		BT2497	0.20	+0.9
3,120,198	-		BT2497	0.25	-1.4
3,120,283	-		BT2497	0.33	-0.1
3,120,299	+		BT2497	0.34	-1.3
3,120,302	-		BT2497	0.35	-1.5
3,120,441	+		BT2497	0.47	-1.3
3,120,441	+		BT2497	0.47	-1.3
3,120,460	-		BT2497	0.49	-0.7
3,120,510	-		BT2497	0.54	-1.7
3,120,519	+				-0.7
3,120,520	-		BT2497	0.54	-1.3
3,120,522	+		BT2497	0.55	+1.3
3,120,540	+		BT2497	0.56	-2.1
3,120,541	-		BT2497	0.56	-0.7
3,120,589	-		BT2497	0.61	+0.3
3,120,675	+		BT2497	0.69	+0.3
3,120,675	+		BT2497	0.69	-1.6
3,120,686	-		BT2497	0.70	-2.4
3,120,688	-		BT2497	0.70	-0.7
3,120,704	+		BT2497	0.71	-1.4
3,120,744	+		BT2497	0.75	+0.0
3,120,875	+		BT2497	0.87	-2.7
3,120,880	-		BT2497	0.87	-2.1
3,120,880	-		BT2497	0.87	+1.9
3,120,919	-				-1.5
3,120,919	-				-1.1
3,120,948	+				-0.3
3,120,949	-				-1.0
3,120,974	+				-1.8
3,121,159	+				-1.5
3,121,202	-		BT2498	0.13	-1.0
3,121,212	+		BT2498	0.14	-1.9
3,121,213	-		BT2498	0.14	-1.3
3,121,256	-		BT2498	0.17	-1.4
3,121,307	+		BT2498	0.21	+0.3
3,121,307	+		BT2498	0.21	-1.1
3,121,307	+		BT2498	0.21	-1.5
3,121,309	+		BT2498	0.21	-1.5
3,121,309	+		BT2498	0.21	-0.6
3,121,309	+		BT2498	0.21	-3.6
3,121,310	-		BT2498	0.21	-3.1
3,121,345	-		BT2498	0.23	-0.7
3,121,351	+		BT2498	0.24	-1.0
3,121,356	+		BT2498	0.24	-2.9
3,121,391	+		BT2498	0.27	-0.9
3,121,468	+		BT2498	0.33	-0.7
3,121,515	+		BT2498	0.36	-1.2
3,121,559	-		BT2498	0.39	+0.3
3,121,660	+		BT2498	0.47	-0.7
3,121,660	+		BT2498	0.47	-2.3
3,121,660	+		BT2498	0.47	-1.6
3,121,660	+		BT2498	0.47	-0.7
3,121,660	+		BT2498	0.47	+0.3
3,121,660	+		BT2498	0.47	+0.0
3,121,665	-		BT2498	0.47	-0.3
3,121,665	-		BT2498	0.47	-0.5
3,121,666	+		BT2498	0.47	+0.4
3,121,681	-		BT2498	0.49	-0.7
3,121,698	+		BT2498	0.50	-0.7
3,121,699	-		BT2498	0.50	-1.2
3,121,699	-		BT2498	0.50	+0.3
3,121,784	+		BT2498	0.56	+0.3
3,121,785	-		BT2498	0.56	+0.9
3,121,804	+		BT2498	0.58	+0.3
3,121,843	+		BT2498	0.61	-2.4
3,121,844	-		BT2498	0.61	-0.3
3,121,848	+		BT2498	0.61	+0.3
3,121,909	-		BT2498	0.66	-2.4
3,121,919	+		BT2498	0.66	-2.1
3,121,920	-		BT2498	0.66	-1.7
3,121,920	-		BT2498	0.66	-1.2
3,121,923	-		BT2498	0.67	+0.0
3,122,058	+		BT2498	0.77	-2.3
3,122,059	-		BT2498	0.77	-1.1
3,122,059	-		BT2498	0.77	+1.3
3,122,108	+		BT2498	0.80	-0.7
3,122,133	-		BT2498	0.82	-1.2
3,122,142	+		BT2498	0.83	-0.2
3,122,142	+		BT2498	0.83	-1.7
3,122,156	-		BT2498	0.84	-0.3
3,122,161	+		BT2498	0.84	-2.1
3,122,239	+				-0.7
3,122,240	-				-0.6
3,122,252	+				-1.4
3,122,252	+				-0.1
3,122,320	-				-1.1
3,122,330	-				+0.9
3,122,367	-				-1.1
3,122,383	+				-1.5
3,122,387	+				-1.0
3,122,442	+				-2.1
3,122,442	+				+0.3
3,122,443	-				-0.3
3,122,477	+				-2.3
3,122,478	-				+1.3
3,122,482	-				-1.7
3,122,482	-				+0.3
3,122,486	-				-1.8
3,122,504	-				+0.3
3,122,522	+				-0.3
3,122,527	+				-1.3
3,122,528	-				-0.8
3,122,544	+				-1.7
3,122,545	-				-2.2
3,122,553	+				-0.5
3,122,554	-				+0.3
3,122,554	-				-1.0
3,122,556	-				-2.1
3,122,573	+				+1.3
3,122,580	+				-0.7
3,122,583	+				-2.5
3,122,589	-				-0.7
3,122,698	-		BT2499	0.15	-1.9
3,122,740	+		BT2499	0.19	+0.3
3,122,788	+		BT2499	0.24	-0.9
3,122,794	+		BT2499	0.24	-0.8
3,122,908	-		BT2499	0.35	-1.3
3,122,908	-		BT2499	0.35	-0.7
3,122,910	-		BT2499	0.35	-1.7
3,122,911	+		BT2499	0.36	-2.3
3,122,911	+		BT2499	0.36	+0.3
3,122,911	+		BT2499	0.36	-0.8
3,122,911	+		BT2499	0.36	+1.3
3,122,911	+		BT2499	0.36	-0.6
3,122,912	-		BT2499	0.36	+0.3
3,122,912	-		BT2499	0.36	-1.7
3,122,912	-		BT2499	0.36	-0.9
3,122,915	-		BT2499	0.36	-2.1
3,122,915	-		BT2499	0.36	-0.7
3,122,915	-		BT2499	0.36	-2.5
3,122,915	-		BT2499	0.36	-1.2
3,122,963	+		BT2499	0.41	+1.3
3,123,034	+		BT2499	0.48	-2.1
3,123,034	+		BT2499	0.48	-2.5
3,123,054	+		BT2499	0.49	-1.0
3,123,093	-		BT2499	0.53	-1.7
3,123,262	+		BT2499	0.70	-0.7
3,123,271	-		BT2499	0.71	-1.4
3,123,349	-		BT2499	0.78	-1.3