Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1615

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,983,825	+				+0.1
1,983,825	+				+0.3
1,983,877	+				-0.9
1,983,896	-				-1.5
1,983,896	-				-0.9
1,983,915	+				+1.7
1,983,935	+		BT1613	0.10	+2.1
1,983,935	+		BT1613	0.10	+0.1
1,983,936	-		BT1613	0.10	+0.1
1,983,937	+		BT1613	0.10	+0.1
1,983,937	+		BT1613	0.10	-0.6
1,983,938	-		BT1613	0.11	+0.1
1,983,938	-		BT1613	0.11	-0.9
1,983,945	-		BT1613	0.12	-0.5
1,983,992	+		BT1613	0.20	-1.5
1,983,992	+		BT1613	0.20	+0.1
1,984,008	-		BT1613	0.23	+2.4
1,984,010	+		BT1613	0.23	-1.1
1,984,058	+		BT1613	0.31	-0.1
1,984,059	-		BT1613	0.31	-1.9
1,984,064	+		BT1613	0.32	+0.1
1,984,064	+		BT1613	0.32	-1.5
1,984,065	-		BT1613	0.32	-0.5
1,984,094	+		BT1613	0.37	+0.1
1,984,141	+		BT1613	0.46	-0.9
1,984,141	+		BT1613	0.46	+0.1
1,984,142	-		BT1613	0.46	+0.1
1,984,303	+		BT1613	0.73	-1.5
1,984,304	-		BT1613	0.74	+0.1
1,984,304	-		BT1613	0.74	+1.7
1,984,320	-		BT1613	0.76	+1.1
1,984,320	-		BT1613	0.76	-0.9
1,984,323	+		BT1613	0.77	-1.5
1,984,333	+		BT1613	0.79	+0.1
1,984,334	-		BT1613	0.79	-1.5
1,984,334	-		BT1613	0.79	+1.1
1,984,380	-		BT1613	0.87	-0.9
1,984,395	-		BT1613	0.89	-2.1
1,984,447	-				-0.9
1,984,463	-				+1.4
1,984,468	-				-1.5
1,984,513	+				-2.2
1,984,513	+				+0.1
1,984,686	-		BT1614	0.77	+0.1
1,984,686	-		BT1614	0.77	-1.5
1,984,718	+				+0.1
1,984,846	+				-0.2
1,984,847	-				+0.7
1,984,847	-				+0.1
1,984,975	-		BT1615	0.13	-0.9
1,985,013	+		BT1615	0.15	-1.5
1,985,013	+		BT1615	0.15	+0.1
1,985,083	-		BT1615	0.19	-0.1
1,985,128	-		BT1615	0.22	-1.5
1,985,227	-		BT1615	0.29	+0.5
1,985,484	+		BT1615	0.45	+0.1
1,985,525	-		BT1615	0.48	-1.5
1,985,556	+		BT1615	0.50	-1.5
1,985,655	-		BT1615	0.56	-1.9
1,985,655	-		BT1615	0.56	-1.2
1,985,659	+		BT1615	0.57	-1.9
1,985,710	+		BT1615	0.60	+1.7
1,985,727	+		BT1615	0.61	+1.1
1,985,813	-		BT1615	0.67	-1.5
1,985,815	+		BT1615	0.67	-0.5
1,985,816	-		BT1615	0.67	-1.5
1,985,816	-		BT1615	0.67	-1.2
1,985,840	+		BT1615	0.68	+2.9
1,985,841	-		BT1615	0.68	+0.1
1,985,859	+		BT1615	0.70	-1.2
1,985,859	+		BT1615	0.70	+0.1
1,985,859	+		BT1615	0.70	-1.9
1,985,859	+		BT1615	0.70	-0.9
1,985,860	-		BT1615	0.70	-2.2
1,985,860	-		BT1615	0.70	-2.4
1,985,861	+		BT1615	0.70	-0.5
1,985,861	+		BT1615	0.70	+0.1
1,985,862	-		BT1615	0.70	-1.5
1,985,878	+		BT1615	0.71	+2.1
1,985,892	+		BT1615	0.72	-0.9
1,985,971	+		BT1615	0.77	-1.1
1,986,127	-		BT1615	0.87	-1.2
1,986,191	+				-0.6
1,986,201	+				-0.2
1,986,223	+				+0.1
1,986,351	-				-0.7
1,986,406	+				+0.1
1,986,407	-				-2.5
1,986,429	+				-0.4
1,986,430	-				-0.9
1,986,430	-				-2.6
1,986,431	+				-0.5
1,986,646	-		BT1616	0.23	+0.1
1,986,654	+		BT1616	0.24	-0.6
1,986,675	-		BT1616	0.26	+0.1
1,986,754	+		BT1616	0.33	-0.9
1,986,754	+		BT1616	0.33	-0.3
1,986,758	-		BT1616	0.33	+0.1
1,986,805	-		BT1616	0.37	-0.6
1,986,810	-		BT1616	0.38	+0.1
1,986,810	-		BT1616	0.38	-0.5
1,986,855	+		BT1616	0.42	-1.7
1,986,868	+		BT1616	0.43	+0.1
1,986,878	-		BT1616	0.44	-0.9
1,987,162	+		BT1616	0.69	-1.2
1,987,166	-		BT1616	0.69	-0.9
1,987,166	-		BT1616	0.69	-0.9
1,987,218	+		BT1616	0.74	-0.8
1,987,265	+		BT1616	0.78	-1.5
1,987,271	+		BT1616	0.79	+0.4
1,987,319	-		BT1616	0.83	+0.7