Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4697

Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; filtered 2.5 mg/ml (C)
6,164,731	+		BT4696	0.23	-2.6
6,164,909	+		BT4696	0.46	-1.0
6,164,950	+		BT4696	0.51	-0.0
6,165,085	+		BT4696	0.69	-1.0
6,165,096	+		BT4696	0.70	+0.3
6,165,234	-		BT4696	0.88	-1.0
6,165,234	-		BT4696	0.88	-0.7
6,165,250	-				-1.4
6,165,288	-				+0.5
6,165,332	-				-1.4
6,165,339	+				-0.5
6,165,339	+				-1.0
6,165,339	+				-1.6
6,165,406	-				-1.6
6,165,478	-				-0.5
6,165,499	-				+0.1
6,165,521	-				-0.0
6,165,524	+				-0.3
6,165,533	+				-2.0
6,165,559	+				-0.6
6,165,622	+				-0.6
6,165,663	+				+1.3
6,165,664	-				-1.5
6,165,664	-				+2.0
6,165,699	-				-1.0
6,165,701	-				-0.0
6,165,722	+				-0.7
6,165,800	+				-0.4
6,165,801	-				+1.3
6,165,810	+				-0.8
6,165,811	-				+0.4
6,165,811	-				+0.5
6,165,813	-				-0.4
6,165,813	-				+1.5
6,165,899	+		BT4697	0.11	-0.0
6,165,901	+		BT4697	0.11	+2.0
6,165,902	-		BT4697	0.11	-0.6
6,165,910	+		BT4697	0.12	-1.0
6,165,924	+		BT4697	0.13	-0.6
6,165,932	+		BT4697	0.13	+0.3
6,165,932	+		BT4697	0.13	-0.6
6,165,932	+		BT4697	0.13	-1.6
6,165,933	-		BT4697	0.13	-0.0
6,165,936	+		BT4697	0.13	-0.0
6,165,936	+		BT4697	0.13	-3.0
6,165,936	+		BT4697	0.13	+0.4
6,165,937	-		BT4697	0.13	-1.3
6,165,937	-		BT4697	0.13	-0.2
6,165,938	+		BT4697	0.13	+0.7
6,165,939	-		BT4697	0.13	-1.2
6,165,944	+		BT4697	0.14	+1.0
6,165,944	+		BT4697	0.14	-2.2
6,165,976	-		BT4697	0.15	-1.8
6,165,976	-		BT4697	0.15	-0.8
6,166,007	+		BT4697	0.17	+1.0
6,166,007	+		BT4697	0.17	-0.5
6,166,046	-		BT4697	0.19	-0.2
6,166,046	-		BT4697	0.19	-1.6
6,166,068	-		BT4697	0.21	+2.3
6,166,076	+		BT4697	0.21	-0.8
6,166,076	+		BT4697	0.21	-0.0
6,166,197	+		BT4697	0.28	-0.8
6,166,197	+		BT4697	0.28	-0.4
6,166,217	+		BT4697	0.29	-0.4
6,166,218	-		BT4697	0.29	-0.0
6,166,218	-		BT4697	0.29	-1.0
6,166,235	+		BT4697	0.30	-1.6
6,166,276	-		BT4697	0.32	-0.3
6,166,317	-		BT4697	0.35	-0.7
6,166,359	-		BT4697	0.37	-1.0
6,166,367	-		BT4697	0.38	-0.0
6,166,370	+		BT4697	0.38	-0.0
6,166,370	+		BT4697	0.38	-0.3
6,166,370	+		BT4697	0.38	+2.0
6,166,371	-		BT4697	0.38	-0.8
6,166,371	-		BT4697	0.38	-0.3
6,166,371	-		BT4697	0.38	-0.6
6,166,411	-		BT4697	0.40	-1.6
6,166,413	-		BT4697	0.40	+1.0
6,166,416	+		BT4697	0.40	-0.0
6,166,416	+		BT4697	0.40	+0.4
6,166,417	-		BT4697	0.40	-2.2
6,166,438	-		BT4697	0.42	+0.4
6,166,438	-		BT4697	0.42	-1.5
6,166,438	-		BT4697	0.42	-1.0
6,166,483	-		BT4697	0.44	-1.0
6,166,491	+		BT4697	0.45	-2.0
6,166,567	-		BT4697	0.49	-0.0
6,166,674	-		BT4697	0.55	-0.5
6,166,721	+		BT4697	0.58	-0.8
6,166,739	+		BT4697	0.59	-2.7
6,166,740	-		BT4697	0.59	-1.8
6,166,742	+		BT4697	0.59	-1.6
6,166,742	+		BT4697	0.59	-1.0
6,166,755	-		BT4697	0.59	+0.5
6,166,777	+		BT4697	0.61	-0.7
6,166,778	-		BT4697	0.61	-0.8
6,166,791	-		BT4697	0.62	-0.6
6,166,812	+		BT4697	0.63	-2.4
6,166,926	-		BT4697	0.69	-0.0
6,167,003	-		BT4697	0.74	-0.5
6,167,008	+		BT4697	0.74	-2.0
6,167,180	-		BT4697	0.84	-1.0
6,167,180	-		BT4697	0.84	-0.0
6,167,180	-		BT4697	0.84	+2.3
6,167,276	+		BT4697	0.89	+1.3
6,167,289	+		BT4697	0.90	+1.0
6,167,295	-				-2.0
6,167,295	-				-1.0
6,167,309	+				-0.0
6,167,309	+				-4.5
6,167,310	-				-0.0
6,167,314	-				-1.0
6,167,314	-				-1.0
6,167,349	-				+0.3
6,167,388	-				-1.0
6,167,393	+				-0.0
6,167,393	+				-0.4
6,167,401	-				-1.0
6,167,405	+				+1.0
6,167,406	-				-0.6
6,167,406	-				-0.8
6,167,513	-				-0.5
6,167,513	-				-0.8
6,167,519	-				-2.0
6,167,527	+				+1.5
6,167,532	-				+1.0
6,167,570	-				-1.4
6,167,570	-				-0.0
6,167,674	-		BT4698	0.36	+1.3
6,167,675	+		BT4698	0.37	-0.6
6,167,831	-		BT4698	0.80	+0.3
6,167,852	-		BT4698	0.85	-2.0
6,167,852	-		BT4698	0.85	-0.4
6,167,878	+				-1.4
6,167,879	-				-1.6
6,168,213	+		BT4699	0.18	-2.8
6,168,213	+		BT4699	0.18	-1.6
6,168,336	+		BT4699	0.28	-3.8