Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1202
Experiment: Galactan from Potato; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Galactan from Potato; filtered 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
1,496,668 | - | BT1200 | 0.47 | -0.4 | |
1,496,748 | + | BT1200 | 0.64 | +0.9 | |
1,496,966 | + | -2.6 | |||
1,496,970 | - | -0.1 | |||
1,496,970 | - | -2.1 | |||
1,497,190 | + | BT1201 | 0.41 | -1.6 | |
1,497,193 | + | BT1201 | 0.41 | -1.2 | |
1,497,302 | - | BT1201 | 0.59 | -0.1 | |
1,497,452 | + | BT1201 | 0.82 | -0.1 | |
1,497,565 | - | -0.1 | |||
1,497,572 | - | -0.1 | |||
1,497,973 | + | BT1202 | 0.69 | -0.3 | |
1,498,064 | + | BT1202 | 0.88 | -0.1 | |
1,498,151 | + | -0.1 | |||
1,498,155 | - | -0.1 | |||
1,498,216 | - | BT1203 | 0.18 | +0.9 | |
1,498,353 | + | BT1203 | 0.40 | -1.1 | |
1,498,370 | + | BT1203 | 0.43 | -1.3 | |
1,498,371 | - | BT1203 | 0.43 | -1.6 | |
1,498,401 | + | BT1203 | 0.48 | +0.9 | |
1,498,514 | - | BT1203 | 0.66 | +0.7 | |
1,498,986 | - | -1.4 | |||
1,499,047 | - | -0.1 | |||
1,499,049 | - | -0.6 |
Or see this region's nucleotide sequence