Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4582

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
6,002,582	+				-1.1
6,002,585	-		BT4581	0.62	-0.1
6,002,667	+		BT4581	0.66	-0.9
6,002,667	+		BT4581	0.66	-1.6
6,002,668	-		BT4581	0.66	-1.4
6,002,668	-		BT4581	0.66	-1.1
6,002,668	-		BT4581	0.66	-1.4
6,002,724	+		BT4581	0.68	-1.5
6,002,747	-		BT4581	0.69	-1.6
6,002,813	-		BT4581	0.72	-1.3
6,002,825	-		BT4581	0.73	-2.6
6,002,872	+		BT4581	0.75	-1.4
6,002,872	+		BT4581	0.75	-1.7
6,002,929	-		BT4581	0.78	+0.1
6,002,936	-		BT4581	0.78	-0.1
6,002,965	-		BT4581	0.79	-2.1
6,003,012	-		BT4581	0.82	-2.6
6,003,078	-		BT4581	0.85	-1.1
6,003,101	+		BT4581	0.86	+0.4
6,003,106	+		BT4581	0.86	+0.4
6,003,218	+				-3.1
6,003,230	+				-1.1
6,003,233	+				-1.1
6,003,234	-				+0.9
6,003,234	-				-1.4
6,003,623	+				+0.1
6,003,624	-				-1.1
6,003,628	+				-1.1
6,003,683	-				+0.9
6,003,683	-				-0.1
6,003,729	+		BT4582	0.11	-1.1
6,003,934	-		BT4582	0.26	-0.1
6,003,976	-		BT4582	0.29	-0.4
6,003,980	+		BT4582	0.29	-0.1
6,003,981	-		BT4582	0.29	+0.9
6,003,981	-		BT4582	0.29	+0.5
6,004,026	+		BT4582	0.32	+0.5
6,004,211	+		BT4582	0.45	-0.1
6,004,211	+		BT4582	0.45	+0.9
6,004,212	-		BT4582	0.45	+0.9
6,004,291	+		BT4582	0.51	+0.9
6,004,291	+		BT4582	0.51	-0.1
6,004,292	-		BT4582	0.51	-0.4
6,004,292	-		BT4582	0.51	-0.1
6,004,315	+		BT4582	0.53	+1.9
6,004,316	-		BT4582	0.53	+1.9
6,004,332	-		BT4582	0.54	-1.1
6,004,426	-		BT4582	0.60	+0.9
6,004,426	-		BT4582	0.60	-2.1
6,004,449	+		BT4582	0.62	-1.1
6,004,462	+		BT4582	0.63	-0.9
6,004,463	-		BT4582	0.63	-0.1
6,004,504	-		BT4582	0.66	-1.6
6,004,504	-		BT4582	0.66	-0.1
6,004,676	+		BT4582	0.78	-0.1
6,004,677	-		BT4582	0.78	+0.4
6,004,680	+		BT4582	0.78	-0.7
6,004,680	+		BT4582	0.78	+0.9
6,004,681	-		BT4582	0.79	-1.0
6,004,708	+		BT4582	0.80	+0.8
6,004,708	+		BT4582	0.80	-0.1
6,004,740	+		BT4582	0.83	-1.1
6,004,770	+		BT4582	0.85	-1.6
6,004,774	-		BT4582	0.85	-1.2
6,004,774	-		BT4582	0.85	-2.1
6,004,968	+				+0.9
6,004,969	-				-0.6
6,004,981	+				+0.9
6,004,981	+				-0.8
6,004,988	+				-1.6
6,004,991	-				-2.2
6,005,056	+				-1.1
6,005,102	+				-1.1
6,005,130	+				-2.9
6,005,209	-				-0.1
6,005,245	+		BT4583	0.12	-0.8
6,005,295	-		BT4583	0.16	-2.0
6,005,296	+		BT4583	0.16	-0.1
6,005,296	+		BT4583	0.16	-1.4
6,005,297	-		BT4583	0.16	+0.7
6,005,297	-		BT4583	0.16	-0.1
6,005,368	+		BT4583	0.22	-0.1
6,005,378	+		BT4583	0.22	-2.8
6,005,391	+		BT4583	0.24	-2.4
6,005,392	-		BT4583	0.24	-1.0
6,005,392	-		BT4583	0.24	-1.0
6,005,406	-		BT4583	0.25	-0.1
6,005,471	+		BT4583	0.30	-0.1
6,005,471	+		BT4583	0.30	-1.1
6,005,526	-		BT4583	0.35	-1.3
6,005,766	-		BT4583	0.54	-0.6
6,005,766	-		BT4583	0.54	-1.1
6,005,793	-		BT4583	0.56	-0.5
6,005,801	-		BT4583	0.57	-2.6
6,005,875	-		BT4583	0.63	-1.1
6,005,934	+		BT4583	0.68	-1.1
6,005,935	-		BT4583	0.68	-2.1
6,005,935	-		BT4583	0.68	-1.6
6,005,936	+		BT4583	0.68	-0.2
6,005,936	+		BT4583	0.68	-0.6