Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3700

Experiment: Galactan from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato; autoclaved 2.5 mg/ml (C)
4,803,771	+	SusF	BT3699	0.49	-0.0
4,803,829	+	SusF	BT3699	0.53	-1.3
4,803,834	+	SusF	BT3699	0.53	-0.0
4,803,835	-	SusF	BT3699	0.53	-0.6
4,803,860	-	SusF	BT3699	0.55	-1.2
4,803,876	+	SusF	BT3699	0.56	-1.2
4,803,935	+	SusF	BT3699	0.60	-1.4
4,803,936	-	SusF	BT3699	0.60	-1.0
4,804,010	-	SusF	BT3699	0.65	+0.7
4,804,011	+	SusF	BT3699	0.65	-0.3
4,804,011	+	SusF	BT3699	0.65	-2.3
4,804,011	+	SusF	BT3699	0.65	-0.6
4,804,012	-	SusF	BT3699	0.65	-0.0
4,804,012	-	SusF	BT3699	0.65	-1.6
4,804,014	-	SusF	BT3699	0.65	-2.0
4,804,066	+	SusF	BT3699	0.69	-1.2
4,804,067	-	SusF	BT3699	0.69	-0.6
4,804,108	+	SusF	BT3699	0.72	+0.3
4,804,145	-	SusF	BT3699	0.74	-0.0
4,804,166	+	SusF	BT3699	0.76	+1.4
4,804,167	-	SusF	BT3699	0.76	-2.0
4,804,284	+	SusF	BT3699	0.84	-0.4
4,804,542	-				+1.6
4,804,545	+				-1.0
4,804,729	+	SusE	BT3700	0.16	-1.1
4,804,729	+	SusE	BT3700	0.16	-0.6
4,804,729	+	SusE	BT3700	0.16	-1.5
4,804,867	-	SusE	BT3700	0.28	-0.6
4,804,926	+	SusE	BT3700	0.33	+0.6
4,805,021	-	SusE	BT3700	0.41	+0.6
4,805,023	-	SusE	BT3700	0.41	-1.3
4,805,082	+	SusE	BT3700	0.46	-1.8
4,805,127	-	SusE	BT3700	0.50	-2.3
4,805,127	-	SusE	BT3700	0.50	-2.3
4,805,150	-	SusE	BT3700	0.52	-1.3
4,805,150	-	SusE	BT3700	0.52	-0.0
4,805,150	-	SusE	BT3700	0.52	-2.1
4,805,156	+	SusE	BT3700	0.53	-1.0
4,805,287	-	SusE	BT3700	0.64	-1.4
4,805,287	-	SusE	BT3700	0.64	-2.1
4,805,288	+	SusE	BT3700	0.64	-0.6
4,805,288	+	SusE	BT3700	0.64	-2.0
4,805,289	-	SusE	BT3700	0.64	-2.6
4,805,419	+	SusE	BT3700	0.75	-0.0
4,805,420	-	SusE	BT3700	0.75	-0.6
4,805,421	+	SusE	BT3700	0.75	-2.3
4,805,422	-	SusE	BT3700	0.75	-0.0
4,805,422	-	SusE	BT3700	0.75	-3.2
4,805,491	+	SusE	BT3700	0.81	-0.0
4,805,492	-	SusE	BT3700	0.81	-3.0
4,805,492	-	SusE	BT3700	0.81	-0.0
4,805,535	-	SusE	BT3700	0.85	-1.6
4,805,561	+	SusE	BT3700	0.87	-0.4
4,805,562	-	SusE	BT3700	0.87	-1.0
4,805,562	-	SusE	BT3700	0.87	-2.5
4,805,577	+	SusE	BT3700	0.89	-1.7
4,805,602	+				-2.0
4,805,657	+				-1.1
4,805,688	-				-1.6
4,805,721	+				-1.4
4,805,724	-				-1.9
4,805,725	+				-1.7
4,805,748	-				+1.0
4,805,768	+				-0.8
4,805,768	+				-1.6
4,805,815	+				-0.0
4,805,869	+				-1.6
4,805,874	-				-2.5
4,805,888	+				-2.2
4,805,929	+	SusD	BT3701	0.11	-2.0
4,806,073	+	SusD	BT3701	0.20	-2.2
4,806,074	-	SusD	BT3701	0.20	-2.0
4,806,119	+	SusD	BT3701	0.23	-1.6
4,806,231	+	SusD	BT3701	0.30	-0.0
4,806,242	-	SusD	BT3701	0.30	+0.6
4,806,243	+	SusD	BT3701	0.30	-1.3
4,806,244	-	SusD	BT3701	0.30	-2.2
4,806,336	+	SusD	BT3701	0.36	-2.0
4,806,483	-	SusD	BT3701	0.45	-2.8
4,806,496	+	SusD	BT3701	0.46	-2.4
4,806,511	+	SusD	BT3701	0.46	-1.2
4,806,512	-	SusD	BT3701	0.46	-1.5
4,806,515	+	SusD	BT3701	0.47	-2.0
4,806,515	+	SusD	BT3701	0.47	-2.8
4,806,516	-	SusD	BT3701	0.47	-1.0
4,806,619	-	SusD	BT3701	0.53	-1.4
4,806,619	-	SusD	BT3701	0.53	-0.6
4,806,623	+	SusD	BT3701	0.53	-0.8
4,806,623	+	SusD	BT3701	0.53	-1.4
4,806,652	+	SusD	BT3701	0.55	-1.8
4,806,688	+	SusD	BT3701	0.57	-0.8
4,806,688	+	SusD	BT3701	0.57	-1.9