Experiment: D-Glucose 5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0751 and BT0752 are separated by 93 nucleotides BT0752 and BT0753 are separated by 76 nucleotides
BT0751: BT0751 - putative efflux pump component protein (NCBI ptt file), at 932,954 to 934,390
BT0751
BT0752: BT0752 - putative RNA polymerase ECF-type sigma factor (NCBI ptt file), at 934,484 to 935,071
BT0752
BT0753: BT0753 - putative anti-sigma factor (NCBI ptt file), at 935,148 to 936,173
BT0753
Position (kb) 934
935
936 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 933.699 kb on + strand, within BT0751 at 933.701 kb on + strand, within BT0751 at 933.701 kb on + strand, within BT0751 at 933.701 kb on + strand, within BT0751 at 933.702 kb on - strand, within BT0751 at 933.737 kb on + strand, within BT0751 at 933.737 kb on + strand, within BT0751 at 934.254 kb on - strand at 934.254 kb on - strand at 934.356 kb on + strand at 934.443 kb on - strand at 934.559 kb on + strand, within BT0752 at 934.575 kb on + strand, within BT0752 at 934.576 kb on - strand, within BT0752 at 934.577 kb on + strand, within BT0752 at 934.599 kb on - strand, within BT0752 at 934.602 kb on - strand, within BT0752 at 934.606 kb on - strand, within BT0752 at 934.606 kb on - strand, within BT0752 at 934.633 kb on - strand, within BT0752 at 934.713 kb on + strand, within BT0752 at 934.726 kb on + strand, within BT0752 at 934.765 kb on - strand, within BT0752 at 934.929 kb on - strand, within BT0752 at 935.049 kb on + strand at 935.113 kb on - strand at 935.120 kb on + strand at 935.121 kb on - strand at 935.158 kb on - strand at 935.161 kb on - strand at 935.190 kb on - strand at 935.192 kb on + strand at 935.333 kb on - strand, within BT0753 at 935.497 kb on + strand, within BT0753 at 935.502 kb on - strand, within BT0753 at 935.602 kb on + strand, within BT0753 at 935.603 kb on - strand, within BT0753 at 935.760 kb on + strand, within BT0753 at 935.771 kb on + strand, within BT0753 at 935.775 kb on + strand, within BT0753 at 935.776 kb on - strand, within BT0753 at 935.865 kb on + strand, within BT0753
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 5 mg/ml (C) remove 933,699 + BT0751 0.52 +2.0 933,701 + BT0751 0.52 -1.8 933,701 + BT0751 0.52 +1.0 933,701 + BT0751 0.52 +0.0 933,702 - BT0751 0.52 -0.5 933,737 + BT0751 0.54 -0.5 933,737 + BT0751 0.54 +0.5 934,254 - +0.0 934,254 - +0.0 934,356 + -2.4 934,443 - -0.7 934,559 + BT0752 0.13 -2.8 934,575 + BT0752 0.15 -2.1 934,576 - BT0752 0.16 -2.0 934,577 + BT0752 0.16 -3.4 934,599 - BT0752 0.20 -2.0 934,602 - BT0752 0.20 +1.0 934,606 - BT0752 0.21 -1.5 934,606 - BT0752 0.21 -1.3 934,633 - BT0752 0.25 +0.6 934,713 + BT0752 0.39 -1.0 934,726 + BT0752 0.41 -1.0 934,765 - BT0752 0.48 -2.0 934,929 - BT0752 0.76 +0.0 935,049 + -1.5 935,113 - -1.7 935,120 + -2.0 935,121 - +2.4 935,158 - -0.9 935,161 - +1.6 935,190 - +1.0 935,192 + -0.3 935,333 - BT0753 0.18 +0.0 935,497 + BT0753 0.34 -1.0 935,502 - BT0753 0.35 -3.0 935,602 + BT0753 0.44 -3.0 935,603 - BT0753 0.44 -0.5 935,760 + BT0753 0.60 -1.2 935,771 + BT0753 0.61 +0.4 935,775 + BT0753 0.61 -1.6 935,776 - BT0753 0.61 -1.0 935,865 + BT0753 0.70 +0.0
Or see this region's nucleotide sequence