Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4146

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,443,346	+		BT4145	0.70	-0.8
5,443,411	+		BT4145	0.73	-2.4
5,443,448	+		BT4145	0.74	-1.6
5,443,469	+		BT4145	0.75	-2.7
5,443,518	+		BT4145	0.77	-1.0
5,443,523	-		BT4145	0.77	-1.6
5,443,576	+		BT4145	0.79	-1.0
5,443,576	+		BT4145	0.79	-0.4
5,443,576	+		BT4145	0.79	+0.5
5,443,646	+		BT4145	0.81	-2.0
5,443,646	+		BT4145	0.81	-1.3
5,443,646	+		BT4145	0.81	-2.0
5,443,769	-		BT4145	0.86	-1.0
5,443,954	-				-0.0
5,443,954	-				-0.9
5,443,960	+				-2.5
5,444,002	+				-1.3
5,444,003	-				-0.0
5,444,018	-				-1.6
5,444,145	+				-2.6
5,444,146	-				-0.9
5,444,180	-				+1.0
5,444,187	+				-0.9
5,444,187	+				-1.3
5,444,270	+				+1.0
5,444,292	+				+1.0
5,444,292	+				-3.0
5,444,398	-		BT4146	0.17	-1.0
5,444,400	+		BT4146	0.17	+1.6
5,444,400	+		BT4146	0.17	-1.6
5,444,401	-		BT4146	0.17	-1.6
5,444,403	-		BT4146	0.17	-2.6
5,444,405	-		BT4146	0.17	-0.7
5,444,491	+		BT4146	0.23	-2.3
5,444,609	-		BT4146	0.32	-2.0
5,444,618	-		BT4146	0.32	-2.0
5,444,645	+		BT4146	0.34	-3.5
5,444,832	+		BT4146	0.48	-2.2
5,444,945	+		BT4146	0.56	-0.8
5,444,990	+		BT4146	0.59	-0.9
5,445,020	+		BT4146	0.61	-1.6
5,445,353	-		BT4146	0.85	-2.0
5,445,401	+		BT4146	0.88	-0.0
5,445,502	+				-1.4
5,445,504	+				-0.0
5,445,551	+				-0.0
5,445,556	-				-0.0
5,445,645	-				-1.3
5,445,648	-				-0.8
5,445,676	-				-3.6
5,445,717	-		BT4147	0.10	-0.4
5,445,955	+		BT4147	0.50	-0.0
5,445,971	-		BT4147	0.53	-0.5
5,445,972	+		BT4147	0.53	-1.5
5,446,014	+		BT4147	0.60	-1.0
5,446,014	+		BT4147	0.60	+1.6
5,446,150	-		BT4147	0.83	-0.0
5,446,333	+		BT4148	0.62	-1.0
5,446,333	+		BT4148	0.62	-1.0
5,446,345	+		BT4148	0.68	-0.6
5,446,418	-				-0.0
5,446,452	-				-0.4
5,446,479	+				-1.0
5,446,481	+				-1.0
5,446,482	-				+0.6
5,446,482	-				-3.2