Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1974

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,482,132	+		BT1973	0.39	+0.0
2,482,132	+		BT1973	0.39	+0.5
2,482,132	+		BT1973	0.39	+1.6
2,482,132	+		BT1973	0.39	-2.0
2,482,132	+		BT1973	0.39	-2.0
2,482,133	-		BT1973	0.39	-0.5
2,482,133	-		BT1973	0.39	-0.5
2,482,133	-		BT1973	0.39	-0.6
2,482,133	-		BT1973	0.39	-2.6
2,482,145	+		BT1973	0.40	+0.0
2,482,146	-		BT1973	0.40	-0.6
2,482,146	-		BT1973	0.40	-1.6
2,482,146	-		BT1973	0.40	-2.3
2,482,247	+		BT1973	0.48	+0.0
2,482,282	-		BT1973	0.50	-0.8
2,482,285	+		BT1973	0.50	+0.0
2,482,285	+		BT1973	0.50	-1.3
2,482,327	-		BT1973	0.54	-1.0
2,482,376	-		BT1973	0.57	-0.5
2,482,397	+		BT1973	0.59	-3.0
2,482,398	-		BT1973	0.59	-1.0
2,482,398	-		BT1973	0.59	-1.0
2,482,399	+		BT1973	0.59	+0.6
2,482,400	-		BT1973	0.59	+0.7
2,482,404	-		BT1973	0.59	-1.0
2,482,439	+		BT1973	0.62	-1.4
2,482,439	+		BT1973	0.62	-2.0
2,482,440	-		BT1973	0.62	-1.2
2,482,440	-		BT1973	0.62	-1.6
2,482,441	+		BT1973	0.62	-3.1
2,482,441	+		BT1973	0.62	-1.4
2,482,441	+		BT1973	0.62	+0.3
2,482,441	+		BT1973	0.62	-0.8
2,482,497	-		BT1973	0.66	-1.8
2,482,515	+		BT1973	0.68	+1.0
2,482,549	+		BT1973	0.70	+0.0
2,482,550	-		BT1973	0.70	-1.2
2,482,581	+		BT1973	0.72	+1.0
2,482,675	-		BT1973	0.80	-0.2
2,482,697	+		BT1973	0.81	-1.4
2,482,698	-		BT1973	0.81	-1.5
2,482,848	-				-2.0
2,482,852	+				+0.4
2,482,877	+				-2.0
2,482,914	+				-0.7
2,482,925	-				-0.4
2,482,969	-				-1.5
2,482,969	-				-0.6
2,482,969	-				-0.1
2,482,974	+				-1.0
2,482,974	+				-1.8
2,483,023	+				-2.0
2,483,079	+				-1.0
2,483,081	+				-2.9
2,483,081	+				-2.3
2,483,082	-				-1.3
2,483,086	+				-1.6
2,483,086	+				-1.2
2,483,089	+				-1.0
2,483,182	-				-2.0
2,483,182	-				+0.7
2,483,187	+				-2.3
2,483,199	-				+0.4
2,483,209	+				-0.4
2,483,209	+				-1.9
2,483,219	+		BT1974	0.10	-1.0
2,483,236	+		BT1974	0.12	-1.4
2,483,236	+		BT1974	0.12	+0.0
2,483,236	+		BT1974	0.12	+0.0
2,483,403	+		BT1974	0.26	+1.6
2,483,410	+		BT1974	0.27	+0.0
2,483,410	+		BT1974	0.27	-0.7
2,483,410	+		BT1974	0.27	-0.6
2,483,411	-		BT1974	0.27	+1.0
2,483,566	+		BT1974	0.40	-0.8
2,483,566	+		BT1974	0.40	+0.0
2,483,566	+		BT1974	0.40	+1.0
2,483,567	-		BT1974	0.40	-2.8
2,483,567	-		BT1974	0.40	-2.8
2,483,586	+		BT1974	0.42	-1.0
2,483,808	+		BT1974	0.61	+0.4
2,483,839	+		BT1974	0.63	-1.0
2,483,842	-		BT1974	0.64	-1.7
2,483,895	+		BT1974	0.68	+0.3
2,483,896	-		BT1974	0.68	-0.4
2,483,975	-		BT1974	0.75	-0.6
2,483,977	-		BT1974	0.75	+0.7
2,484,092	+		BT1974	0.85	-1.0
2,484,092	+		BT1974	0.85	-1.0
2,484,092	+		BT1974	0.85	-1.0
2,484,092	+		BT1974	0.85	-0.5
2,484,179	+				-1.3
2,484,179	+				-1.0
2,484,347	+				+0.0
2,484,396	+				-2.5
2,484,461	+				-1.8
2,484,495	-				-1.0