Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1913

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,400,825	+				-1.1
2,400,826	-				-3.6
2,400,826	-				-3.3
2,400,829	+				-0.6
2,400,829	+				-1.6
2,400,830	-				-1.7
2,400,830	-				-0.6
2,400,900	-				-3.6
2,400,915	-				-0.8
2,400,928	+				-0.6
2,400,978	+				-1.6
2,400,996	-				+0.6
2,401,023	-				-2.0
2,401,069	-				-0.6
2,401,103	+				-2.1
2,401,103	+				-0.9
2,401,103	+				-0.7
2,401,114	+				-0.3
2,401,243	-				-0.2
2,401,281	+				+0.0
2,401,341	+				+0.0
2,401,341	+				-0.7
2,401,342	-				-1.6
2,401,344	+				-1.6
2,401,345	-				-0.5
2,401,494	+		BT1912	0.23	+0.3
2,401,495	-		BT1912	0.24	+0.5
2,401,521	+		BT1912	0.36	-1.6
2,401,572	+		BT1912	0.61	-1.0
2,401,666	-				-0.3
2,401,743	+				-1.4
2,401,767	+				-3.0
2,401,768	-				+0.2
2,401,776	+				+1.0
2,401,794	-				-1.6
2,401,795	+				-1.6
2,401,795	+				-3.7
2,401,795	+				-1.0
2,401,795	+				-2.3
2,401,796	-				+0.4
2,401,796	-				+1.0
2,401,812	-				+1.0
2,401,817	+				+0.3
2,401,818	-				-0.6
2,401,818	-				+0.0
2,401,882	+		BT1913	0.10	-0.4
2,401,882	+		BT1913	0.10	+0.0
2,401,990	+		BT1913	0.20	+0.0
2,402,044	+		BT1913	0.24	-1.6
2,402,044	+		BT1913	0.24	+0.0
2,402,111	+		BT1913	0.30	-0.6
2,402,112	-		BT1913	0.30	-0.6
2,402,112	-		BT1913	0.30	-1.0
2,402,119	-		BT1913	0.31	-2.8
2,402,169	+		BT1913	0.35	-0.4
2,402,188	-		BT1913	0.37	+0.0
2,402,346	-		BT1913	0.50	-1.4
2,402,360	+		BT1913	0.51	-2.3
2,402,361	-		BT1913	0.51	+1.0
2,402,429	-		BT1913	0.57	-1.8
2,402,443	+		BT1913	0.58	-0.4
2,402,469	+		BT1913	0.61	+0.0
2,402,507	+		BT1913	0.64	-0.4
2,402,510	-		BT1913	0.64	-2.3
2,402,556	+		BT1913	0.68	-0.2
2,402,622	-		BT1913	0.74	-1.8
2,402,709	-		BT1913	0.81	+0.0
2,402,756	-		BT1913	0.85	-1.8
2,402,765	-		BT1913	0.86	+0.6
2,402,872	+				-2.3
2,402,892	+				+0.0
2,402,893	-				-1.3
2,402,905	-				-0.6
2,402,928	-				-0.8
2,403,005	+				-1.0
2,403,129	+				-1.6
2,403,261	-		BT1914	0.37	+0.0
2,403,261	-		BT1914	0.37	-1.8
2,403,296	-		BT1914	0.48	-0.7
2,403,302	-		BT1914	0.49	+0.0
2,403,302	-		BT1914	0.49	-1.7
2,403,302	-		BT1914	0.49	-0.9
2,403,485	-				+0.0
2,403,506	+				+1.0
2,403,532	-				-0.4
2,403,651	+				-1.6
2,403,758	-				-3.2
2,403,758	-				-0.3
2,403,815	-				-2.0
2,403,920	+				-3.4