Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1549

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
1,910,526	-				-0.1
1,910,528	-				-2.4
1,910,603	-				-1.4
1,910,638	+				-0.4
1,910,696	+				-0.1
1,910,811	-		BT1549	0.13	+0.7
1,910,818	+		BT1549	0.13	-1.1
1,910,823	-		BT1549	0.14	-2.8
1,910,903	+		BT1549	0.18	-0.1
1,910,975	+		BT1549	0.23	-0.7
1,910,976	-		BT1549	0.23	-0.4
1,910,978	+		BT1549	0.23	-2.2
1,910,979	-		BT1549	0.23	-2.6
1,911,029	-		BT1549	0.26	+0.5
1,911,043	-		BT1549	0.27	+1.3
1,911,050	+		BT1549	0.27	-1.5
1,911,051	-		BT1549	0.27	-0.4
1,911,052	+		BT1549	0.28	-1.6
1,911,053	-		BT1549	0.28	+1.9
1,911,180	+		BT1549	0.35	+0.5
1,911,237	+		BT1549	0.39	-1.6
1,911,450	-		BT1549	0.52	-0.1
1,911,451	+		BT1549	0.52	-2.4
1,911,559	+		BT1549	0.58	-0.6
1,911,560	-		BT1549	0.59	+0.9
1,911,685	-		BT1549	0.66	-0.1
1,911,737	+		BT1549	0.69	+0.4
1,911,786	-		BT1549	0.72	-2.4
1,911,786	-		BT1549	0.72	+0.9
1,911,787	+		BT1549	0.72	-0.6
1,911,790	+		BT1549	0.73	-1.5
1,911,797	-		BT1549	0.73	-0.1
1,912,033	+		BT1549	0.87	+0.5
1,912,060	+		BT1549	0.89	-1.1
1,912,064	+		BT1549	0.89	-0.8
1,912,102	+				-1.6
1,912,239	-				-0.1
1,912,240	+				-0.4
1,912,240	+				-0.1
1,912,243	-				-1.1
1,912,391	-				-0.5
1,912,413	+				-1.7
1,912,552	+		BT1550	0.18	-0.8
1,912,554	+		BT1550	0.18	-1.9
1,912,555	-		BT1550	0.18	-0.8
1,912,555	-		BT1550	0.18	-1.2
1,912,610	+		BT1550	0.21	-0.1
1,912,782	+		BT1550	0.32	-0.1
1,912,793	+		BT1550	0.32	-0.1
1,912,806	-		BT1550	0.33	-2.5
1,912,879	-		BT1550	0.38	-1.1
1,912,974	+		BT1550	0.43	-0.1
1,913,054	-		BT1550	0.48	-1.1
1,913,054	-		BT1550	0.48	-2.4
1,913,083	-		BT1550	0.50	+1.7
1,913,138	+		BT1550	0.53	-1.9
1,913,187	+		BT1550	0.56	+0.9
1,913,204	-		BT1550	0.57	+0.9
1,913,227	-		BT1550	0.59	-1.3