Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0102

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
92,006	-		BT0101	0.23	-1.1
92,031	-		BT0101	0.25	+0.5
92,031	-		BT0101	0.25	-0.1
92,031	-		BT0101	0.25	+1.5
92,071	-		BT0101	0.28	-0.1
92,071	-		BT0101	0.28	-0.7
92,074	+		BT0101	0.28	-0.4
92,075	-		BT0101	0.28	-0.7
92,263	-		BT0101	0.43	+1.5
92,336	-		BT0101	0.49	-2.4
92,336	-		BT0101	0.49	-0.5
92,340	-		BT0101	0.49	+0.5
92,347	-		BT0101	0.50	-0.3
92,651	-		BT0101	0.75	-0.7
92,662	-		BT0101	0.75	-0.3
92,664	-		BT0101	0.76	-3.0
92,664	-		BT0101	0.76	-0.7
92,964	-				+0.3
93,034	-				+1.2
93,073	+				+0.5
93,180	-				-0.6
93,183	+				-1.4
93,203	+		BT0102	0.11	-0.1
93,204	-		BT0102	0.11	-1.0
93,228	+		BT0102	0.12	-2.4
93,271	+		BT0102	0.14	+1.4
93,361	+		BT0102	0.19	-2.7
93,362	-		BT0102	0.19	-1.1
93,370	-		BT0102	0.19	-1.7
93,507	-		BT0102	0.26	-0.8
93,515	+		BT0102	0.26	-1.7
93,541	-		BT0102	0.28	-0.8
93,662	+		BT0102	0.34	-0.1
93,682	+		BT0102	0.35	-2.4
93,683	-		BT0102	0.35	-0.1
93,688	+		BT0102	0.35	-1.0
93,689	-		BT0102	0.35	+0.9
93,689	-		BT0102	0.35	-0.5
93,689	-		BT0102	0.35	-1.7
93,724	+		BT0102	0.37	-1.7
93,780	-		BT0102	0.40	-0.1
93,802	-		BT0102	0.41	-1.1
93,816	+		BT0102	0.41	-1.4
93,871	+		BT0102	0.44	+0.3
93,881	-		BT0102	0.45	-0.6
93,884	+		BT0102	0.45	-1.3
93,978	-		BT0102	0.49	-0.1
93,999	+		BT0102	0.50	-0.7
93,999	+		BT0102	0.50	-0.5
93,999	+		BT0102	0.50	-1.1
93,999	+		BT0102	0.50	-1.7
93,999	+		BT0102	0.50	-1.7
93,999	+		BT0102	0.50	-1.1
93,999	+		BT0102	0.50	-0.8
93,999	+		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	+0.9
94,000	-		BT0102	0.50	+0.2
94,000	-		BT0102	0.50	+1.4
94,000	-		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	-2.4
94,000	-		BT0102	0.50	-1.7
94,000	-		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	+0.0
94,000	-		BT0102	0.50	+0.6
94,000	-		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	-1.5
94,000	-		BT0102	0.50	-0.1
94,000	-		BT0102	0.50	-2.4
94,000	-		BT0102	0.50	-1.1
94,000	-		BT0102	0.50	-1.7
94,000	-		BT0102	0.50	-2.8
94,270	-		BT0102	0.64	-0.9
94,315	-		BT0102	0.66	-0.1
94,442	+		BT0102	0.72	-1.7
94,635	+		BT0102	0.82	-2.7
94,636	-		BT0102	0.82	-0.7
94,816	+				-1.9
94,976	+				+0.3
95,057	-				-0.8
95,074	-				-2.1
95,111	+				-1.7
95,112	-				-0.7
95,231	-				-1.1
95,406	-		BT0103	0.15	-2.4
95,644	-		BT0103	0.31	-2.7
95,644	-		BT0103	0.31	+0.3
95,644	-		BT0103	0.31	-1.7
95,644	-		BT0103	0.31	-0.1
95,695	+		BT0103	0.34	-1.7
95,748	+		BT0103	0.38	+0.5