Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1618

Experiment: Pullulan; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pullulan; autoclaved 2.5 mg/ml (C)
1,987,265	+		BT1616	0.78	-2.2
1,987,271	+		BT1616	0.79	-0.1
1,987,319	-		BT1616	0.83	+0.5
1,987,384	+		BT1616	0.89	-0.6
1,987,427	+				-2.5
1,987,431	+				-1.4
1,987,431	+				-1.2
1,987,500	-				-1.6
1,987,500	-				-1.1
1,987,500	-				-2.1
1,987,501	+				-2.1
1,987,532	-				-0.1
1,987,635	+				-0.5
1,987,681	+		BT1617	0.14	-1.3
1,987,685	-		BT1617	0.15	-1.6
1,987,704	+		BT1617	0.18	-1.6
1,987,794	+		BT1617	0.34	-0.9
1,987,869	-		BT1617	0.48	-1.9
1,987,906	+		BT1617	0.54	-1.5
1,988,019	+		BT1617	0.74	-0.1
1,988,020	-		BT1617	0.74	-1.6
1,988,116	-				-1.7
1,988,172	-				-1.0
1,988,211	-				-2.1
1,988,211	-				-1.9
1,988,215	-				+1.3
1,988,473	+		BT1618	0.23	-2.1
1,988,474	-		BT1618	0.23	-1.9
1,988,475	+		BT1618	0.23	-0.1
1,988,476	-		BT1618	0.23	-2.4
1,988,476	-		BT1618	0.23	-0.1
1,988,507	+		BT1618	0.26	+0.9
1,988,508	-		BT1618	0.26	-1.6
1,988,529	+		BT1618	0.28	-2.1
1,988,530	-		BT1618	0.29	-1.1
1,988,532	-		BT1618	0.29	-0.9
1,988,542	+		BT1618	0.30	-0.5
1,988,543	-		BT1618	0.30	-1.9
1,988,547	-		BT1618	0.30	+1.9
1,988,547	-		BT1618	0.30	-1.9
1,988,548	+		BT1618	0.30	-0.1
1,988,549	-		BT1618	0.30	+0.9
1,988,551	-		BT1618	0.31	-2.1
1,988,552	+		BT1618	0.31	-2.5
1,988,553	-		BT1618	0.31	-1.4
1,988,553	-		BT1618	0.31	-1.4
1,988,591	-		BT1618	0.35	-2.1
1,988,664	-		BT1618	0.42	-1.9
1,988,664	-		BT1618	0.42	-1.1
1,988,705	+		BT1618	0.46	-0.1
1,988,707	+		BT1618	0.46	-0.1
1,988,895	+		BT1618	0.65	+0.9
1,988,896	-		BT1618	0.65	-1.1
1,988,930	-		BT1618	0.68	-0.1
1,989,057	-		BT1618	0.81	-2.0
1,989,058	+		BT1618	0.81	-1.5
1,989,065	+		BT1618	0.82	-2.4
1,989,066	-		BT1618	0.82	-1.0
1,989,066	-		BT1618	0.82	+1.9
1,989,104	+		BT1618	0.86	-1.4
1,989,105	-		BT1618	0.86	-1.6
1,989,105	-		BT1618	0.86	-0.6
1,989,105	-		BT1618	0.86	-2.1
1,989,105	-		BT1618	0.86	-1.5
1,989,105	-		BT1618	0.86	-0.6
1,989,107	-		BT1618	0.86	-3.0
1,989,109	-		BT1618	0.86	-1.1
1,989,185	-				-0.4
1,989,185	-				-2.1
1,989,185	-				-1.6
1,989,186	+				-1.1
1,989,187	-				-0.1
1,989,187	-				-1.1
1,989,326	-				-1.3
1,989,342	+				-1.6
1,989,389	-				-0.1
1,989,436	+				-0.6
1,989,452	-				-1.3
1,989,456	+				-1.5
1,989,543	-				+0.5
1,989,677	+				-1.9
1,989,678	-				-2.6
1,989,681	-				-1.7
1,989,726	-		BT1619	0.11	-0.6
1,989,749	-		BT1619	0.11	-0.6
1,989,766	+		BT1619	0.12	-0.1
1,989,790	+		BT1619	0.12	-0.8
1,989,953	-		BT1619	0.17	-2.5
1,989,969	-		BT1619	0.18	+0.9
1,989,978	-		BT1619	0.18	-1.1
1,990,040	-		BT1619	0.20	-1.6
1,990,049	-		BT1619	0.20	-2.9
1,990,167	+		BT1619	0.23	-1.4