Experiment: Pullulan; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0842 and BT0843 are separated by 35 nucleotides BT0843 and BT0844 are separated by 1 nucleotides BT0844 and BT0845 are separated by 65 nucleotides BT0845 and BT0846 are separated by 50 nucleotides BT0846 and BT0847 are separated by 193 nucleotides BT0847 and BT0848 overlap by 4 nucleotides
BT0842: BT0842 - hypothetical protein (NCBI ptt file), at 1,036,966 to 1,037,154
BT0842
BT0843: BT0843 - hypothetical protein (NCBI ptt file), at 1,037,190 to 1,037,546
BT0843
BT0844: BT0844 - hypothetical protein (NCBI ptt file), at 1,037,548 to 1,037,925
BT0844
BT0845: BT0845 - hypothetical protein (NCBI ptt file), at 1,037,991 to 1,038,497
BT0845
BT0846: BT0846 - hypothetical protein (NCBI ptt file), at 1,038,548 to 1,038,907
BT0846
BT0847: BT0847 - hypothetical protein (NCBI ptt file), at 1,039,101 to 1,039,295
BT0847
BT0848: BT0848 - hypothetical protein (NCBI ptt file), at 1,039,292 to 1,039,510
BT0848
Position (kb)
1037
1038
1039 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1037.020 kb on - strand, within BT0842 at 1037.086 kb on + strand, within BT0842 at 1037.115 kb on + strand, within BT0842 at 1037.119 kb on - strand, within BT0842 at 1037.143 kb on - strand at 1037.143 kb on - strand at 1037.143 kb on - strand at 1037.155 kb on - strand at 1037.243 kb on + strand, within BT0843 at 1037.243 kb on + strand, within BT0843 at 1037.243 kb on + strand, within BT0843 at 1037.244 kb on - strand, within BT0843 at 1037.247 kb on + strand, within BT0843 at 1037.248 kb on - strand, within BT0843 at 1037.278 kb on - strand, within BT0843 at 1037.279 kb on + strand, within BT0843 at 1037.280 kb on - strand, within BT0843 at 1037.343 kb on + strand, within BT0843 at 1037.381 kb on - strand, within BT0843 at 1037.381 kb on - strand, within BT0843 at 1037.386 kb on - strand, within BT0843 at 1037.481 kb on + strand, within BT0843 at 1037.591 kb on + strand, within BT0844 at 1037.630 kb on + strand, within BT0844 at 1037.741 kb on - strand, within BT0844 at 1037.925 kb on + strand at 1037.955 kb on + strand at 1037.959 kb on + strand at 1037.979 kb on + strand at 1037.988 kb on + strand at 1037.992 kb on + strand at 1037.993 kb on - strand at 1038.011 kb on + strand at 1038.012 kb on - strand at 1038.082 kb on - strand, within BT0845 at 1038.093 kb on - strand, within BT0845 at 1038.134 kb on - strand, within BT0845 at 1038.155 kb on - strand, within BT0845 at 1038.276 kb on + strand, within BT0845 at 1038.313 kb on + strand, within BT0845 at 1038.356 kb on + strand, within BT0845 at 1038.357 kb on - strand, within BT0845 at 1038.365 kb on + strand, within BT0845 at 1038.478 kb on - strand at 1038.501 kb on - strand at 1038.520 kb on - strand at 1038.563 kb on - strand at 1038.624 kb on - strand, within BT0846 at 1038.651 kb on + strand, within BT0846 at 1038.652 kb on - strand, within BT0846 at 1038.653 kb on + strand, within BT0846 at 1038.654 kb on - strand, within BT0846 at 1038.661 kb on - strand, within BT0846 at 1038.718 kb on + strand, within BT0846 at 1038.810 kb on - strand, within BT0846 at 1038.911 kb on - strand at 1038.979 kb on - strand at 1038.986 kb on - strand at 1039.001 kb on - strand at 1039.014 kb on + strand at 1039.027 kb on + strand at 1039.083 kb on - strand at 1039.122 kb on - strand, within BT0847 at 1039.161 kb on + strand, within BT0847 at 1039.203 kb on + strand, within BT0847 at 1039.204 kb on - strand, within BT0847 at 1039.226 kb on + strand, within BT0847 at 1039.227 kb on - strand, within BT0847 at 1039.230 kb on + strand, within BT0847 at 1039.231 kb on - strand, within BT0847 at 1039.231 kb on - strand, within BT0847 at 1039.234 kb on + strand, within BT0847 at 1039.234 kb on + strand, within BT0847 at 1039.351 kb on + strand, within BT0848 at 1039.388 kb on - strand, within BT0848 at 1039.412 kb on - strand, within BT0848 at 1039.420 kb on - strand, within BT0848 at 1039.432 kb on + strand, within BT0848
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan; autoclaved 2.5 mg/ml (C) remove 1,037,020 - BT0842 0.29 -1.6 1,037,086 + BT0842 0.63 -1.6 1,037,115 + BT0842 0.79 -0.1 1,037,119 - BT0842 0.81 -0.6 1,037,143 - -1.6 1,037,143 - -1.1 1,037,143 - +0.9 1,037,155 - +1.5 1,037,243 + BT0843 0.15 +0.5 1,037,243 + BT0843 0.15 +0.5 1,037,243 + BT0843 0.15 -2.4 1,037,244 - BT0843 0.15 -0.6 1,037,247 + BT0843 0.16 +2.3 1,037,248 - BT0843 0.16 -0.6 1,037,278 - BT0843 0.25 -2.4 1,037,279 + BT0843 0.25 -0.1 1,037,280 - BT0843 0.25 -0.1 1,037,343 + BT0843 0.43 -2.4 1,037,381 - BT0843 0.54 -1.1 1,037,381 - BT0843 0.54 -0.6 1,037,386 - BT0843 0.55 -1.1 1,037,481 + BT0843 0.82 -0.5 1,037,591 + BT0844 0.11 -0.1 1,037,630 + BT0844 0.22 +0.5 1,037,741 - BT0844 0.51 -0.1 1,037,925 + +0.2 1,037,955 + -0.9 1,037,959 + +0.9 1,037,979 + +1.5 1,037,988 + -1.1 1,037,992 + -0.7 1,037,993 - -2.1 1,038,011 + -0.6 1,038,012 - -1.1 1,038,082 - BT0845 0.18 -0.3 1,038,093 - BT0845 0.20 -2.1 1,038,134 - BT0845 0.28 -1.1 1,038,155 - BT0845 0.32 -2.1 1,038,276 + BT0845 0.56 -2.4 1,038,313 + BT0845 0.64 -2.1 1,038,356 + BT0845 0.72 -1.3 1,038,357 - BT0845 0.72 -1.1 1,038,365 + BT0845 0.74 -1.4 1,038,478 - -1.9 1,038,501 - -0.1 1,038,520 - -1.5 1,038,563 - -0.1 1,038,624 - BT0846 0.21 -0.1 1,038,651 + BT0846 0.29 -0.1 1,038,652 - BT0846 0.29 -2.1 1,038,653 + BT0846 0.29 +0.9 1,038,654 - BT0846 0.29 -0.2 1,038,661 - BT0846 0.31 -1.1 1,038,718 + BT0846 0.47 -1.1 1,038,810 - BT0846 0.73 -1.1 1,038,911 - -1.4 1,038,979 - +0.5 1,038,986 - -0.1 1,039,001 - -1.1 1,039,014 + -0.6 1,039,027 + -0.6 1,039,083 - -0.8 1,039,122 - BT0847 0.11 -0.1 1,039,161 + BT0847 0.31 -0.1 1,039,203 + BT0847 0.52 -1.6 1,039,204 - BT0847 0.53 -2.5 1,039,226 + BT0847 0.64 -1.4 1,039,227 - BT0847 0.65 -1.1 1,039,230 + BT0847 0.66 -0.6 1,039,231 - BT0847 0.67 -0.1 1,039,231 - BT0847 0.67 -1.1 1,039,234 + BT0847 0.68 -0.1 1,039,234 + BT0847 0.68 -1.4 1,039,351 + BT0848 0.27 -1.1 1,039,388 - BT0848 0.44 +1.9 1,039,412 - BT0848 0.55 -1.1 1,039,420 - BT0848 0.58 -0.1 1,039,432 + BT0848 0.64 -1.6
Or see this region's nucleotide sequence