Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4532

Experiment: Xylan from corn core; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core; autoclaved 2.5 mg/ml (C)
5,948,990	-		BT4531	0.12	-0.0
5,949,047	+		BT4531	0.18	-1.0
5,949,048	-		BT4531	0.18	+2.0
5,949,048	-		BT4531	0.18	-1.7
5,949,048	-		BT4531	0.18	-0.7
5,949,076	-		BT4531	0.20	-1.6
5,949,150	-		BT4531	0.27	-1.1
5,949,158	-		BT4531	0.28	-0.9
5,949,158	-		BT4531	0.28	-1.0
5,949,160	+		BT4531	0.28	+0.7
5,949,211	+		BT4531	0.33	+0.4
5,949,239	-		BT4531	0.36	-1.0
5,949,311	-		BT4531	0.43	-1.6
5,949,347	-		BT4531	0.46	+2.0
5,949,461	-		BT4531	0.57	-0.0
5,949,481	-		BT4531	0.59	-0.0
5,949,481	-		BT4531	0.59	-0.0
5,949,513	-		BT4531	0.62	-2.0
5,949,527	-		BT4531	0.63	-2.6
5,949,706	-		BT4531	0.80	-0.5
5,949,726	-		BT4531	0.82	-0.8
5,949,728	-		BT4531	0.82	+2.0
5,949,853	-				-0.0
5,949,914	+				-0.4
5,949,921	-				-0.3
5,949,956	+				-1.3
5,949,957	-				-2.4
5,949,957	-				-3.5
5,949,960	+				-0.0
5,949,960	+				-0.0
5,949,961	-				-1.5
5,949,962	+				+0.2
5,949,972	-				-3.5
5,949,973	+				-0.7
5,950,010	-				-2.8
5,950,010	-				+2.5
5,950,015	+				-0.8
5,950,054	-		BT4532	0.22	+2.3
5,950,054	-		BT4532	0.22	-0.0
5,950,058	-		BT4532	0.23	-1.4
5,950,058	-		BT4532	0.23	-1.0
5,950,119	-		BT4532	0.42	+0.5
5,950,165	-		BT4532	0.57	-0.0
5,950,202	+		BT4532	0.68	+1.0
5,950,202	+		BT4532	0.68	-0.8
5,950,203	-		BT4532	0.69	-1.0
5,950,218	-		BT4532	0.73	+0.5
5,950,222	-		BT4532	0.75	-1.6
5,950,230	-		BT4532	0.77	-1.6
5,950,257	+		BT4532	0.86	-0.0
5,950,283	-				-1.0
5,950,283	-				+1.5
5,950,287	+				-1.1
5,950,330	-				-1.7
5,950,330	-				-0.0
5,950,332	-				-0.6
5,950,363	+				-2.6
5,950,363	+				+0.5
5,950,397	+				-1.6
5,950,397	+				-0.0
5,950,398	-				-1.6
5,950,439	-				-0.6
5,950,462	+				-0.0
5,950,463	-				-2.0
5,950,552	+				-1.0
5,950,552	+				-1.3
5,950,553	-				-2.0
5,950,588	-				-0.6
5,950,590	+				-1.4
5,950,609	+				-1.6
5,950,617	+				+0.5
5,950,617	+				-1.4
5,950,647	-				-1.2
5,950,716	+				+0.4
5,950,754	-				-1.0
5,950,781	+				-0.0
5,950,782	-				-1.0
5,950,786	+				-1.6
5,950,826	-				-0.6
5,950,872	-				-1.0
5,950,948	+		BT4533	0.12	-1.4
5,951,027	+		BT4533	0.18	-1.8
5,951,027	+		BT4533	0.18	-0.5
5,951,064	-		BT4533	0.21	-1.0
5,951,107	-		BT4533	0.24	-0.4
5,951,111	+		BT4533	0.24	-1.6
5,951,145	+		BT4533	0.27	-1.0
5,951,177	+		BT4533	0.29	-0.6
5,951,278	+		BT4533	0.37	-2.0
5,951,278	+		BT4533	0.37	-1.2