Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2766

Experiment: Xylan from corn core; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core; autoclaved 2.5 mg/ml (C)
3,425,229	+				-1.0
3,425,230	-				-0.4
3,425,270	-				-1.1
3,425,287	-				+1.6
3,425,329	+				-0.0
3,425,329	+				-0.7
3,425,330	-				+0.6
3,425,330	-				-0.8
3,425,360	+				-0.4
3,425,361	-				-3.0
3,425,367	-				-1.1
3,425,367	-				-1.0
3,425,367	-				-0.6
3,425,384	+				-1.6
3,425,392	+				-2.2
3,425,392	+				-2.6
3,425,426	+				-1.0
3,425,427	-				-0.0
3,425,527	+		BT2765	0.23	+0.6
3,425,542	-		BT2765	0.26	-2.3
3,425,549	-		BT2765	0.27	-1.0
3,425,596	-		BT2765	0.36	-1.0
3,425,615	-		BT2765	0.39	-1.6
3,425,637	-		BT2765	0.43	-0.5
3,425,665	+		BT2765	0.48	-1.0
3,425,666	-		BT2765	0.48	-1.6
3,425,709	-		BT2765	0.56	-0.4
3,425,751	+		BT2765	0.64	-2.0
3,425,766	+		BT2765	0.66	-0.8
3,425,767	-		BT2765	0.67	-0.0
3,425,781	-		BT2765	0.69	+1.3
3,425,781	-		BT2765	0.69	-0.6
3,425,888	-		BT2765	0.89	-0.6
3,425,906	+				-1.0
3,425,911	+				-1.6
3,425,911	+				-1.3
3,425,938	+				-1.6
3,425,938	+				+0.4
3,425,957	+				-0.0
3,425,957	+				-0.0
3,425,961	-				-0.5
3,425,992	+				-1.6
3,425,992	+				-0.0
3,425,992	+				-2.8
3,425,993	-				-1.4
3,426,027	+				+1.0
3,426,028	-				-2.0
3,426,057	-				-1.7
3,426,059	+				-1.6
3,426,063	-				-1.1
3,426,083	+				-1.6
3,426,105	+				-3.3
3,426,112	-				+0.2
3,426,115	-				-2.0
3,426,126	+				-2.0
3,426,127	-				-0.9
3,426,159	-				-0.0
3,426,182	-				+1.0
3,426,239	+				-0.0
3,426,240	-				+0.6
3,426,240	-				-0.0
3,426,243	-				-0.0
3,426,243	-				-1.2
3,426,246	+				+0.6
3,426,332	+		BT2766	0.37	-1.0
3,426,335	+		BT2766	0.38	-0.6
3,426,369	-		BT2766	0.49	+1.2
3,426,369	-		BT2766	0.49	-1.0
3,426,418	-		BT2766	0.64	-0.2
3,426,454	+		BT2766	0.76	-0.4
3,426,486	+		BT2766	0.86	-0.7
3,426,504	-				-0.9
3,426,507	-				+0.2
3,426,523	+				-1.0
3,426,528	-				-2.0
3,426,528	-				-0.5
3,426,528	-				-1.2
3,426,529	+				-0.7
3,426,530	-				-1.3
3,426,530	-				-0.0
3,426,540	-				-0.6
3,426,555	-				-0.6
3,426,579	-				-0.0
3,426,581	+				-1.3
3,426,582	-				-0.0
3,426,582	-				-0.7
3,426,584	-				-0.9
3,426,587	+				-1.0
3,426,656	-				+0.3
3,426,708	+		BT2767	0.15	-0.2
3,426,708	+		BT2767	0.15	-1.0
3,426,746	+		BT2767	0.21	-1.2
3,426,747	-		BT2767	0.21	-0.4
3,426,754	+		BT2767	0.22	-2.7
3,426,755	-		BT2767	0.22	-1.8
3,426,811	-		BT2767	0.31	-0.4
3,426,818	+		BT2767	0.32	-0.0
3,426,818	+		BT2767	0.32	-0.4
3,426,821	-		BT2767	0.33	+0.6
3,426,834	-		BT2767	0.35	-0.0
3,426,841	+		BT2767	0.36	-1.6
3,426,842	-		BT2767	0.36	-0.5
3,426,842	-		BT2767	0.36	-0.6
3,426,842	-		BT2767	0.36	-0.0
3,426,850	-		BT2767	0.38	-0.9
3,427,017	-		BT2767	0.65	-1.5
3,427,193	+				-0.3
3,427,194	-				-0.0
3,427,198	-				-2.3
3,427,198	-				+0.6
3,427,239	+				-2.2
3,427,239	+				+0.6
3,427,304	+				-0.9
3,427,309	-				-1.7
3,427,321	+				-0.0
3,427,321	+				-1.0
3,427,326	+				-3.0
3,427,444	+				-1.0
3,427,495	+		BT2768	0.14	-0.0
3,427,497	+		BT2768	0.15	-0.7
3,427,518	-		BT2768	0.17	+1.6