Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1827

Experiment: Xylan from corn core; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core; autoclaved 2.5 mg/ml (C)
2,289,624	+		BT1826	0.82	-0.0
2,289,786	+		BT1826	0.87	-0.0
2,289,814	+		BT1826	0.88	-0.6
2,289,819	+		BT1826	0.88	-0.2
2,289,820	-		BT1826	0.88	-1.5
2,289,843	+		BT1826	0.89	-1.0
2,289,850	-		BT1826	0.89	-0.0
2,289,969	+				-0.6
2,290,017	+				-0.0
2,290,021	-				+0.2
2,290,044	+				-1.0
2,290,045	-				-1.6
2,290,109	+				-0.0
2,290,128	-				+1.0
2,290,211	+				-0.6
2,290,214	+				-1.0
2,290,214	+				-1.6
2,290,214	+				-0.6
2,290,229	+				-1.5
2,290,262	-				+0.4
2,290,292	+				-1.6
2,290,294	+				-1.0
2,290,332	+				-1.6
2,290,400	-				-2.0
2,290,403	-				-1.6
2,290,405	-				-0.6
2,290,410	+				-1.7
2,290,440	+				-0.0
2,290,504	+				-0.0
2,290,548	+				-1.1
2,290,613	-				-1.4
2,290,654	-				-0.7
2,290,726	-		BT1827	0.17	-0.5
2,290,756	+		BT1827	0.21	-1.0
2,290,756	+		BT1827	0.21	-2.4
2,290,832	+		BT1827	0.29	-1.0
2,290,833	-		BT1827	0.29	+0.7
2,290,874	-		BT1827	0.33	-1.6
2,290,904	-		BT1827	0.36	-0.5
2,291,012	+		BT1827	0.48	-0.5
2,291,078	-		BT1827	0.55	-0.3
2,291,099	+		BT1827	0.57	+0.7
2,291,138	-		BT1827	0.61	-0.2
2,291,152	+		BT1827	0.63	-0.5
2,291,224	+		BT1827	0.71	-1.0
2,291,227	-		BT1827	0.71	+0.5
2,291,227	-		BT1827	0.71	-1.0
2,291,258	-		BT1827	0.74	-0.0
2,291,260	-		BT1827	0.74	-0.5
2,291,284	-		BT1827	0.77	-0.6
2,291,414	-				-0.0
2,291,421	+				-2.0
2,291,457	-				-0.8
2,291,510	+				-0.4
2,291,514	-				-0.5
2,291,514	-				-0.8
2,291,519	+				-0.0
2,291,524	+				-0.9
2,291,525	-				+0.3
2,291,525	-				-0.5
2,291,529	+				-2.6
2,291,529	+				-0.7
2,291,645	+				-1.0
2,291,676	+				-2.6
2,291,676	+				-1.5
2,291,677	-				-1.1
2,291,842	+				-2.0
2,291,866	+				-0.8
2,291,871	-				+1.0
2,291,871	-				-0.8
2,291,871	-				-2.5
2,291,888	-				-2.8
2,291,896	+				+0.4
2,291,902	-				+1.0
2,291,907	-				-1.0
2,291,923	+				-1.0
2,291,964	+				-1.5
2,292,037	-				-1.0
2,292,038	+				-1.0
2,292,060	+				-0.9
2,292,060	+				-0.6
2,292,060	+				+2.0
2,292,061	-				-0.0
2,292,061	-				-0.8
2,292,067	-				-1.1
2,292,083	-				-2.4
2,292,089	+				-0.0
2,292,173	-				-0.3
2,292,182	+				-2.0
2,292,186	+				+0.4
2,292,187	-				-1.8
2,292,309	-				-0.0