Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4722

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
6,196,748	+				-0.0
6,196,749	-				-1.0
6,196,749	-				-0.0
6,196,846	+				-2.0
6,196,852	+				-1.6
6,196,881	+				-0.5
6,196,910	+				-1.6
6,196,911	-				-1.4
6,196,922	+				-0.9
6,196,987	-		BT4722	0.13	-0.8
6,196,987	-		BT4722	0.13	+0.4
6,196,988	+		BT4722	0.13	-2.1
6,196,989	-		BT4722	0.13	-2.0
6,196,996	-		BT4722	0.14	-2.0
6,197,047	-		BT4722	0.23	-1.1
6,197,048	+		BT4722	0.23	-1.7
6,197,081	-		BT4722	0.29	-0.0
6,197,081	-		BT4722	0.29	-1.9
6,197,141	+		BT4722	0.39	-2.8
6,197,161	+		BT4722	0.43	-0.0
6,197,168	+		BT4722	0.44	-2.0
6,197,169	-		BT4722	0.44	-0.6
6,197,172	+		BT4722	0.44	-3.6
6,197,173	-		BT4722	0.45	-1.9
6,197,173	-		BT4722	0.45	-1.0
6,197,188	+		BT4722	0.47	-0.0
6,197,199	+		BT4722	0.49	-1.6
6,197,282	+		BT4722	0.63	-0.3
6,197,433	-		BT4722	0.89	-1.6
6,197,457	+				-0.4
6,197,458	-				-0.4
6,197,458	-				-0.4
6,197,557	+				-1.4
6,197,558	-				-2.4
6,197,582	+				-0.0
6,197,588	-				-1.0
6,197,589	+				-2.0
6,197,590	-				-0.0
6,197,639	+				-1.0
6,197,639	+				-0.6
6,197,704	-		BT4723	0.13	-2.0
6,197,817	+		BT4723	0.25	-0.0
6,197,818	-		BT4723	0.25	-1.3
6,197,818	-		BT4723	0.25	-1.0
6,197,986	-		BT4723	0.42	-0.9
6,198,007	+		BT4723	0.44	-0.0
6,198,150	-		BT4723	0.59	-2.4
6,198,212	-		BT4723	0.65	-1.0
6,198,259	+		BT4723	0.70	-1.0
6,198,310	+		BT4723	0.75	-0.0
6,198,401	+		BT4723	0.85	-0.0
6,198,402	-		BT4723	0.85	-0.0
6,198,493	-				-1.0