Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4060 and BT4061 are separated by 87 nucleotides BT4061 and BT4062 are separated by 95 nucleotides BT4062 and BT4063 are separated by 2 nucleotides
BT4060: BT4060 - NADH dehydrogenase I, chain L (NCBI ptt file), at 5,294,040 to 5,295,971
BT4060
BT4061: BT4061 - NADH dehydrogenase I, chain K (NCBI ptt file), at 5,296,059 to 5,296,367
BT4061
BT4062: BT4062 - NADH dehydrogenase I, chain J (NCBI ptt file), at 5,296,463 to 5,296,975
BT4062
BT4063: BT4063 - NADH dehydrogenase I, chain I (NCBI ptt file), at 5,296,978 to 5,297,466
BT4063
Position (kb) 5296
5297 Strain fitness (log2 ratio) -2
-1
0
1 at 5295.100 kb on - strand, within BT4060 at 5295.113 kb on + strand, within BT4060 at 5295.114 kb on - strand, within BT4060 at 5295.117 kb on + strand, within BT4060 at 5295.118 kb on - strand, within BT4060 at 5295.118 kb on - strand, within BT4060 at 5295.183 kb on + strand, within BT4060 at 5295.191 kb on + strand, within BT4060 at 5295.222 kb on - strand, within BT4060 at 5295.222 kb on - strand, within BT4060 at 5295.251 kb on + strand, within BT4060 at 5295.379 kb on + strand, within BT4060 at 5295.388 kb on + strand, within BT4060 at 5295.414 kb on + strand, within BT4060 at 5295.414 kb on + strand, within BT4060 at 5295.478 kb on + strand, within BT4060 at 5295.481 kb on + strand, within BT4060 at 5295.532 kb on + strand, within BT4060 at 5295.601 kb on + strand, within BT4060 at 5295.604 kb on + strand, within BT4060 at 5295.647 kb on - strand, within BT4060 at 5295.647 kb on - strand, within BT4060 at 5295.650 kb on + strand, within BT4060 at 5295.651 kb on - strand, within BT4060 at 5295.765 kb on - strand, within BT4060 at 5295.767 kb on - strand, within BT4060 at 5295.771 kb on + strand, within BT4060 at 5295.772 kb on - strand, within BT4060 at 5295.835 kb on + strand at 5295.835 kb on + strand at 5295.836 kb on - strand at 5295.849 kb on + strand at 5295.849 kb on + strand at 5295.850 kb on - strand at 5295.869 kb on + strand at 5295.972 kb on - strand at 5295.987 kb on + strand at 5295.987 kb on + strand at 5295.996 kb on + strand at 5296.012 kb on + strand at 5296.137 kb on + strand, within BT4061 at 5296.137 kb on + strand, within BT4061 at 5296.137 kb on + strand, within BT4061 at 5296.137 kb on + strand, within BT4061 at 5296.257 kb on + strand, within BT4061 at 5296.401 kb on + strand at 5296.442 kb on + strand at 5296.442 kb on + strand at 5296.449 kb on + strand at 5296.452 kb on + strand at 5296.540 kb on + strand, within BT4062 at 5296.542 kb on + strand, within BT4062 at 5296.548 kb on + strand, within BT4062 at 5296.548 kb on + strand, within BT4062 at 5296.592 kb on + strand, within BT4062 at 5296.757 kb on + strand, within BT4062 at 5296.761 kb on + strand, within BT4062 at 5296.761 kb on + strand, within BT4062 at 5296.774 kb on + strand, within BT4062 at 5296.869 kb on + strand, within BT4062 at 5296.928 kb on - strand at 5296.949 kb on + strand at 5296.949 kb on + strand at 5297.127 kb on + strand, within BT4063 at 5297.144 kb on + strand, within BT4063 at 5297.150 kb on + strand, within BT4063 at 5297.234 kb on - strand, within BT4063
Per-strain Table
Position Strand Gene LocusTag Fraction amylopectin from maize; autoclaved 2.5 mg/ml (C) remove 5,295,100 - BT4060 0.55 -0.9 5,295,113 + BT4060 0.56 +0.8 5,295,114 - BT4060 0.56 +0.0 5,295,117 + BT4060 0.56 -0.8 5,295,118 - BT4060 0.56 -1.3 5,295,118 - BT4060 0.56 -0.6 5,295,183 + BT4060 0.59 -1.0 5,295,191 + BT4060 0.60 -1.0 5,295,222 - BT4060 0.61 -2.0 5,295,222 - BT4060 0.61 -1.9 5,295,251 + BT4060 0.63 -1.6 5,295,379 + BT4060 0.69 -0.8 5,295,388 + BT4060 0.70 -1.0 5,295,414 + BT4060 0.71 +0.2 5,295,414 + BT4060 0.71 -1.9 5,295,478 + BT4060 0.74 -1.8 5,295,481 + BT4060 0.75 +1.0 5,295,532 + BT4060 0.77 -1.0 5,295,601 + BT4060 0.81 -1.2 5,295,604 + BT4060 0.81 -1.6 5,295,647 - BT4060 0.83 -0.3 5,295,647 - BT4060 0.83 -0.7 5,295,650 + BT4060 0.83 -1.2 5,295,651 - BT4060 0.83 +0.0 5,295,765 - BT4060 0.89 -1.6 5,295,767 - BT4060 0.89 -1.0 5,295,771 + BT4060 0.90 +0.0 5,295,772 - BT4060 0.90 +1.0 5,295,835 + -1.3 5,295,835 + +1.0 5,295,836 - -1.0 5,295,849 + -1.4 5,295,849 + -1.0 5,295,850 - +0.0 5,295,869 + -1.3 5,295,972 - -0.7 5,295,987 + -1.0 5,295,987 + -1.0 5,295,996 + -1.0 5,296,012 + -1.2 5,296,137 + BT4061 0.25 -1.0 5,296,137 + BT4061 0.25 -1.5 5,296,137 + BT4061 0.25 +0.2 5,296,137 + BT4061 0.25 -0.5 5,296,257 + BT4061 0.64 -0.5 5,296,401 + +0.6 5,296,442 + -1.0 5,296,442 + -1.6 5,296,449 + -0.6 5,296,452 + -2.6 5,296,540 + BT4062 0.15 -1.6 5,296,542 + BT4062 0.15 -1.3 5,296,548 + BT4062 0.17 +0.0 5,296,548 + BT4062 0.17 -2.0 5,296,592 + BT4062 0.25 -1.0 5,296,757 + BT4062 0.57 +0.0 5,296,761 + BT4062 0.58 -1.0 5,296,761 + BT4062 0.58 +1.6 5,296,774 + BT4062 0.61 -1.0 5,296,869 + BT4062 0.79 -1.0 5,296,928 - -0.8 5,296,949 + -1.0 5,296,949 + -2.0 5,297,127 + BT4063 0.30 +0.0 5,297,144 + BT4063 0.34 +0.0 5,297,150 + BT4063 0.35 -1.8 5,297,234 - BT4063 0.52 -1.6
Or see this region's nucleotide sequence