Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2208

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
2,776,853	+		BT2206	0.31	+0.2
2,777,066	+		BT2206	0.57	-2.3
2,777,141	+		BT2206	0.66	-1.6
2,777,176	+		BT2206	0.70	-1.3
2,777,194	+		BT2206	0.73	-2.3
2,777,345	+				-1.1
2,777,418	+				+1.0
2,777,426	+				-0.5
2,777,838	+				-0.2
2,777,858	+				-2.0
2,778,009	+		BT2208	0.76	-0.0
2,778,010	-		BT2208	0.76	-2.0
2,778,026	+		BT2208	0.83	+0.4
2,778,039	-		BT2208	0.89	+0.0
2,778,039	-		BT2208	0.89	+0.3
2,778,065	-				+0.6
2,778,065	-				-1.9
2,778,134	+				-1.2
2,778,223	-		BT2209	0.29	-1.0
2,778,340	-		BT2209	0.68	+1.6
2,778,424	+				-0.8
2,778,425	-				-0.8
2,778,448	+				-1.9
2,778,479	-		BT2210	0.17	-0.2
2,778,502	+		BT2210	0.23	-0.9
2,778,502	+		BT2210	0.23	-0.7
2,778,505	-		BT2210	0.24	-0.9
2,778,595	+		BT2210	0.47	+0.0
2,778,596	-		BT2210	0.48	-0.3
2,778,720	+		BT2210	0.80	-1.2
2,778,726	+		BT2210	0.82	-0.5
2,778,775	+				-1.1
2,778,786	+				-1.3
2,778,821	+				-2.3
2,778,823	+				-1.0
2,778,823	+				-1.6
2,778,839	-				-0.5
2,778,892	+				-0.4
2,778,949	-		BT2211	0.12	-0.6