Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1188

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
1,483,447	+				-1.1
1,483,480	+				-0.8
1,483,488	-				-1.6
1,483,700	+		BT1187	0.14	+0.4
1,483,700	+		BT1187	0.14	-0.1
1,483,778	+		BT1187	0.28	+0.9
1,483,826	-		BT1187	0.36	-1.1
1,483,834	+		BT1187	0.38	-0.6
1,483,941	+		BT1187	0.57	-1.3
1,483,958	+		BT1187	0.60	+0.4
1,483,962	-		BT1187	0.61	-2.2
1,484,087	-		BT1187	0.83	-2.6
1,484,140	+				-1.6
1,484,160	-				-0.1
1,484,203	+				-2.1
1,484,345	-				+2.9
1,484,491	-		BT1188	0.15	-2.6
1,484,588	+		BT1188	0.46	-0.1
1,484,648	+		BT1188	0.65	-1.1
1,484,649	-		BT1188	0.66	-2.1
1,484,682	-		BT1188	0.76	-2.4
1,484,683	+		BT1188	0.77	-0.1
1,484,684	-		BT1188	0.77	-1.1
1,484,734	+				-1.1
1,484,737	-				-0.6
1,484,737	-				-1.1
1,485,074	+		BT1189	0.63	+1.4
1,485,115	+		BT1189	0.72	-1.1
1,485,115	+		BT1189	0.72	+2.3
1,485,173	+		BT1189	0.84	-0.1
1,485,182	-		BT1189	0.86	-2.4
1,485,184	+		BT1189	0.87	-0.1
1,485,258	+				-0.6
1,485,307	-				-2.1
1,485,477	+		BT1190	0.11	-2.1
1,485,487	-		BT1190	0.12	-0.1
1,485,489	-		BT1190	0.12	-1.6
1,485,494	-		BT1190	0.13	+2.1
1,485,506	-		BT1190	0.14	-2.5
1,485,550	+		BT1190	0.18	+0.9
1,485,551	-		BT1190	0.18	-2.9
1,485,743	+		BT1190	0.36	-2.1
1,485,743	+		BT1190	0.36	-1.1
1,485,744	-		BT1190	0.36	-1.2
1,485,754	+		BT1190	0.37	-1.6
1,485,755	-		BT1190	0.37	-0.1