Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1540

Experiment: Pectic galactan from potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; filtered 2.5 mg/ml (C)
1,898,914	-				-0.1
1,898,987	+				+0.5
1,899,053	+				-1.3
1,899,053	+				-1.7
1,899,053	+				-1.4
1,899,125	+				-2.4
1,899,242	-		BT1539	0.35	-1.1
1,899,254	+		BT1539	0.38	-1.7
1,899,328	-		BT1539	0.57	-0.1
1,899,328	-		BT1539	0.57	-1.0
1,899,389	+		BT1539	0.72	+0.5
1,899,431	-		BT1539	0.83	-1.9
1,899,435	-		BT1539	0.84	+0.5
1,899,596	+		BT1540	0.11	-0.7
1,899,604	+		BT1540	0.12	-0.8
1,899,657	+		BT1540	0.18	-1.7
1,899,657	+		BT1540	0.18	-1.3
1,899,658	-		BT1540	0.18	-1.1
1,899,729	-		BT1540	0.27	-0.7
1,900,037	+		BT1540	0.64	+0.5
1,900,047	+		BT1540	0.65	-1.1
1,900,086	-		BT1540	0.69	-0.7
1,900,141	+		BT1540	0.76	-0.8
1,900,216	+		BT1540	0.85	-2.1
1,900,308	+				-0.1
1,900,343	+				-1.7
1,900,496	+		BT1541	0.11	-2.9
1,900,513	+		BT1541	0.14	-1.3
1,900,704	+		BT1541	0.47	-1.1
1,900,723	+		BT1541	0.50	-0.7
1,900,793	-		BT1541	0.62	-1.0
1,900,827	-		BT1541	0.68	+0.9
1,900,827	-		BT1541	0.68	-0.1
1,901,062	+				+0.3
1,901,063	-				+0.5
1,901,063	-				-2.1
1,901,084	-				-1.7
1,901,125	+				-2.1
1,901,125	+				-1.1
1,901,125	+				-0.9
1,901,136	+				-1.1
1,901,139	+				-1.1
1,901,252	+				-0.1
1,901,260	-		BT1542	0.10	+0.9
1,901,308	+		BT1542	0.14	-2.7
1,901,326	-		BT1542	0.15	-1.5
1,901,334	+		BT1542	0.16	-3.1
1,901,335	-		BT1542	0.16	-1.7
1,901,341	+		BT1542	0.16	+0.9
1,901,342	-		BT1542	0.16	-0.1
1,901,342	-		BT1542	0.16	-1.4