Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1745

Experiment: Pectic galactan from potato; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; filtered 2.5 mg/ml (C)
2,152,329	-		BT1744	0.73	-2.0
2,152,342	+		BT1744	0.74	-1.0
2,152,343	-		BT1744	0.74	-1.3
2,152,343	-		BT1744	0.74	-0.8
2,152,356	-		BT1744	0.75	-1.6
2,152,380	-		BT1744	0.77	-0.8
2,152,380	-		BT1744	0.77	-1.1
2,152,380	-		BT1744	0.77	-1.0
2,152,396	-		BT1744	0.78	-0.0
2,152,476	-		BT1744	0.83	-0.0
2,152,532	+		BT1744	0.87	-1.6
2,152,533	-		BT1744	0.87	-1.0
2,152,533	-				-1.6
2,152,533	-		BT1744	0.87	-1.3
2,152,567	+		BT1744	0.89	-3.5
2,152,616	+				-1.4
2,152,622	+				-1.3
2,152,622	+				+0.2
2,152,622	+				-0.7
2,152,623	-				-1.6
2,152,623	-				-1.0
2,152,705	-				-0.8
2,152,714	+				-0.0
2,152,719	-				+0.7
2,152,735	-				-0.7
2,152,737	+				-0.8
2,152,746	-				+1.0
2,152,837	+				-1.0
2,152,911	+				-1.3
2,152,912	-				-0.3
2,152,932	-				+0.4
2,152,967	-				-1.0
2,152,975	-				-1.6
2,152,975	-				-1.0
2,152,977	+				-1.0
2,152,978	-				-2.6
2,153,008	-				-2.6
2,153,039	+				+0.2
2,153,061	+				-1.0
2,153,128	-				-1.6
2,153,144	+				-2.0
2,153,296	+				-1.6
2,153,296	+				+1.6
2,153,445	+		BT1745	0.14	-2.8
2,153,519	-		BT1745	0.20	-0.5
2,153,519	-		BT1745	0.20	-0.6
2,153,597	-		BT1745	0.26	-1.3
2,153,619	+		BT1745	0.28	-2.8
2,153,748	+		BT1745	0.39	-0.0
2,153,748	+		BT1745	0.39	-0.6
2,153,749	-		BT1745	0.39	-1.5
2,153,749	-		BT1745	0.39	+1.0
2,153,817	+		BT1745	0.45	-1.6
2,153,818	-		BT1745	0.45	-0.4
2,153,848	+		BT1745	0.47	-1.6
2,153,848	+		BT1745	0.47	-1.2
2,153,848	+		BT1745	0.47	-0.0
2,153,849	-		BT1745	0.47	-1.0
2,153,852	+		BT1745	0.48	-2.0
2,153,852	+		BT1745	0.48	-0.0
2,153,855	-		BT1745	0.48	-1.6
2,153,855	-		BT1745	0.48	-0.0
2,153,920	+		BT1745	0.53	-1.0
2,153,925	-		BT1745	0.54	-0.8
2,153,932	+		BT1745	0.54	-3.0
2,153,932	+		BT1745	0.54	+1.0
2,154,127	+		BT1745	0.71	-1.0
2,154,127	+		BT1745	0.71	-1.2
2,154,128	-		BT1745	0.71	-1.9
2,154,128	-		BT1745	0.71	-1.4
2,154,355	+		BT1745	0.90	-5.5
2,154,457	+				-3.0
2,154,457	+				-1.1
2,154,459	+				-0.0
2,154,459	+				-0.0
2,154,501	+				-0.7
2,154,502	-				-1.8
2,154,514	+				-1.3
2,154,516	+				+1.0
2,154,613	+				+2.3
2,155,158	+		BT1746	0.44	-1.6
2,155,430	+		BT1746	0.67	-2.8