Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24740 and BWI76_RS24745 are separated by 338 nucleotides BWI76_RS24745 and BWI76_RS24750 are separated by 2 nucleotides BWI76_RS24750 and BWI76_RS24755 are separated by 150 nucleotides BWI76_RS24755 and BWI76_RS24760 are separated by 46 nucleotides
BWI76_RS24740: BWI76_RS24740 - GntR family transcriptional regulator, at 5,160,829 to 5,161,605
_RS24740
BWI76_RS24745: BWI76_RS24745 - membrane protein, at 5,161,944 to 5,162,606
_RS24745
BWI76_RS24750: BWI76_RS24750 - membrane protein, at 5,162,609 to 5,162,992
_RS24750
BWI76_RS24755: BWI76_RS24755 - hypothetical protein, at 5,163,143 to 5,163,511
_RS24755
BWI76_RS24760: BWI76_RS24760 - membrane protein, at 5,163,558 to 5,163,863
_RS24760
Position (kb) 5161
5162
5163 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5160.944 kb on - strand, within BWI76_RS24740 at 5161.454 kb on + strand, within BWI76_RS24740 at 5161.472 kb on - strand, within BWI76_RS24740 at 5161.621 kb on - strand at 5161.652 kb on - strand at 5161.678 kb on + strand at 5161.688 kb on + strand at 5161.836 kb on - strand at 5161.903 kb on - strand at 5161.926 kb on + strand at 5161.964 kb on + strand at 5162.032 kb on - strand, within BWI76_RS24745 at 5162.100 kb on - strand, within BWI76_RS24745 at 5162.194 kb on + strand, within BWI76_RS24745 at 5162.238 kb on + strand, within BWI76_RS24745 at 5162.451 kb on + strand, within BWI76_RS24745 at 5162.648 kb on + strand, within BWI76_RS24750 at 5162.688 kb on - strand, within BWI76_RS24750 at 5162.743 kb on + strand, within BWI76_RS24750 at 5162.866 kb on - strand, within BWI76_RS24750 at 5162.982 kb on + strand at 5163.059 kb on - strand at 5163.069 kb on + strand at 5163.084 kb on + strand at 5163.105 kb on - strand at 5163.105 kb on - strand at 5163.133 kb on + strand at 5163.419 kb on - strand, within BWI76_RS24755 at 5163.489 kb on + strand at 5163.523 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 5,160,944 - BWI76_RS24740 0.15 +0.1 5,161,454 + BWI76_RS24740 0.80 -0.2 5,161,472 - BWI76_RS24740 0.83 +0.2 5,161,621 - -2.5 5,161,652 - -1.8 5,161,678 + -0.3 5,161,688 + +0.1 5,161,836 - +1.1 5,161,903 - -0.7 5,161,926 + -0.5 5,161,964 + -0.5 5,162,032 - BWI76_RS24745 0.13 -2.3 5,162,100 - BWI76_RS24745 0.24 -4.9 5,162,194 + BWI76_RS24745 0.38 -0.0 5,162,238 + BWI76_RS24745 0.44 -0.1 5,162,451 + BWI76_RS24745 0.76 -3.4 5,162,648 + BWI76_RS24750 0.10 -1.3 5,162,688 - BWI76_RS24750 0.21 -0.1 5,162,743 + BWI76_RS24750 0.35 -1.0 5,162,866 - BWI76_RS24750 0.67 -0.5 5,162,982 + -0.4 5,163,059 - -0.4 5,163,069 + -2.3 5,163,084 + -2.2 5,163,105 - +1.0 5,163,105 - -0.5 5,163,133 + -0.3 5,163,419 - BWI76_RS24755 0.75 -1.0 5,163,489 + +0.1 5,163,523 + +2.3
Or see this region's nucleotide sequence