Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18895 and BWI76_RS18900 overlap by 1 nucleotides BWI76_RS18900 and BWI76_RS18905 are separated by 74 nucleotides BWI76_RS18905 and BWI76_RS18910 are separated by 287 nucleotides
BWI76_RS18895: BWI76_RS18895 - nitrogenase cofactor biosynthesis protein NifB, at 3,918,844 to 3,920,250
_RS18895
BWI76_RS18900: BWI76_RS18900 - protein NifQ, at 3,920,250 to 3,920,753
_RS18900
BWI76_RS18905: BWI76_RS18905 - putrescine/spermidine ABC transporter, at 3,920,828 to 3,922,186
_RS18905
BWI76_RS18910: BWI76_RS18910 - LysR family transcriptional regulator, at 3,922,474 to 3,923,364
_RS18910
Position (kb)
3920
3921
3922
3923 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3920.014 kb on - strand, within BWI76_RS18895 at 3920.081 kb on - strand, within BWI76_RS18895 at 3920.334 kb on - strand, within BWI76_RS18900 at 3920.451 kb on + strand, within BWI76_RS18900 at 3920.565 kb on - strand, within BWI76_RS18900 at 3920.846 kb on - strand at 3921.562 kb on - strand, within BWI76_RS18905 at 3921.880 kb on + strand, within BWI76_RS18905 at 3921.903 kb on - strand, within BWI76_RS18905 at 3922.283 kb on + strand at 3922.490 kb on + strand at 3922.503 kb on + strand at 3922.586 kb on + strand, within BWI76_RS18910 at 3922.673 kb on + strand, within BWI76_RS18910 at 3922.681 kb on - strand, within BWI76_RS18910 at 3922.683 kb on + strand, within BWI76_RS18910 at 3922.696 kb on - strand, within BWI76_RS18910 at 3922.899 kb on + strand, within BWI76_RS18910 at 3923.095 kb on + strand, within BWI76_RS18910
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 3,920,014 - BWI76_RS18895 0.83 +0.1 3,920,081 - BWI76_RS18895 0.88 -0.6 3,920,334 - BWI76_RS18900 0.17 -0.5 3,920,451 + BWI76_RS18900 0.40 -0.6 3,920,565 - BWI76_RS18900 0.62 -0.0 3,920,846 - -1.0 3,921,562 - BWI76_RS18905 0.54 -0.9 3,921,880 + BWI76_RS18905 0.77 +1.2 3,921,903 - BWI76_RS18905 0.79 -1.3 3,922,283 + -0.3 3,922,490 + -3.4 3,922,503 + -0.1 3,922,586 + BWI76_RS18910 0.13 +1.5 3,922,673 + BWI76_RS18910 0.22 +0.2 3,922,681 - BWI76_RS18910 0.23 -0.3 3,922,683 + BWI76_RS18910 0.23 +1.2 3,922,696 - BWI76_RS18910 0.25 +1.7 3,922,899 + BWI76_RS18910 0.48 +0.6 3,923,095 + BWI76_RS18910 0.70 -0.2
Or see this region's nucleotide sequence