Experiment: KLEB1 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18730 and BWI76_RS18735 are separated by 114 nucleotides BWI76_RS18735 and BWI76_RS18740 are separated by 49 nucleotides BWI76_RS18740 and BWI76_RS18745 are separated by 185 nucleotides
BWI76_RS18730: BWI76_RS18730 - LysR family transcriptional regulator, at 3,883,243 to 3,884,160
_RS18730
BWI76_RS18735: BWI76_RS18735 - tautomerase family protein, at 3,884,275 to 3,884,664
_RS18735
BWI76_RS18740: BWI76_RS18740 - HPP family protein, at 3,884,714 to 3,885,445
_RS18740
BWI76_RS18745: BWI76_RS18745 - adenosylhomocysteinase, at 3,885,631 to 3,886,740
_RS18745
Position (kb)
3884
3885 Strain fitness (log2 ratio)
-2
-1
0
1 at 3883.320 kb on + strand at 3883.438 kb on + strand, within BWI76_RS18730 at 3883.502 kb on - strand, within BWI76_RS18730 at 3883.556 kb on + strand, within BWI76_RS18730 at 3884.076 kb on - strand at 3884.224 kb on + strand at 3884.470 kb on - strand, within BWI76_RS18735 at 3884.485 kb on + strand, within BWI76_RS18735 at 3884.489 kb on + strand, within BWI76_RS18735 at 3884.492 kb on - strand, within BWI76_RS18735 at 3884.667 kb on - strand at 3884.688 kb on + strand at 3884.876 kb on - strand, within BWI76_RS18740 at 3884.876 kb on - strand, within BWI76_RS18740 at 3885.111 kb on + strand, within BWI76_RS18740 at 3885.158 kb on + strand, within BWI76_RS18740 at 3885.192 kb on + strand, within BWI76_RS18740 at 3885.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB1 MOI 0.1 remove 3,883,320 + -0.3 3,883,438 + BWI76_RS18730 0.21 +0.4 3,883,502 - BWI76_RS18730 0.28 -0.1 3,883,556 + BWI76_RS18730 0.34 +0.2 3,884,076 - -0.7 3,884,224 + -0.0 3,884,470 - BWI76_RS18735 0.50 +0.5 3,884,485 + BWI76_RS18735 0.54 +0.4 3,884,489 + BWI76_RS18735 0.55 +1.2 3,884,492 - BWI76_RS18735 0.56 +1.0 3,884,667 - -1.3 3,884,688 + +0.2 3,884,876 - BWI76_RS18740 0.22 +0.6 3,884,876 - BWI76_RS18740 0.22 -2.4 3,885,111 + BWI76_RS18740 0.54 -0.2 3,885,158 + BWI76_RS18740 0.61 -0.4 3,885,192 + BWI76_RS18740 0.65 +1.0 3,885,591 - -1.1
Or see this region's nucleotide sequence